Microarray Probes on PGSC0003DMT400042447
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18420_PI426222305 |
JHI_St_60k_v1 |
GAAGTGACTCTTTTTTGGACACCCTTTGCCTTTTTCTGTATTGGGTATTAATTTTCTTGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400042447
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400042447 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G21870.1 |
+1 |
4e-15 |
72 |
70/183 (38%) |
HSP20-like chaperones superfamily protein | chr4:11603756-11604285 REVERSE LENGTH=134 |
Transcript Sequence (1003 bp)
>PGSC0003DMT400042447 1003 pgsc_dm_v3.4
AAAAAATAAAAAGTATAATAAGATGAGCAATGCCACCAACTTGGCTAGGCATATATAAGG
ACAAAATCAACTCTCTTTTCATCCTCCAAACCAACTAACCACCTCTCTTGCAGCCACCAT
TTTTTCCTCCTAAATCCTCTTCTTCTTTCCAAGAAAATGGAATTCTCAACTTTCCATCCC
TCAACATGGAATTCTTTTTTCACCTCTCCTCTCCTTTTTCCCTATCAGTTCATTCCTGAG
AATTATGTTCACTGGAGAGAGACCCCTGAATCTCACATATACTCTGCTGATCTTCCAGGT
AAACACACACACACACAGAAAAAAAAAATAGTGTTGAACTAGTTGAAGTGACTCTTTTTT
GGACACCCTTTGCCTTTTTCTGTATTGGGTATTAATTTTCTTGAATTTTGGATGTTATAT
TTTTTTTGGATAGGTGTGAAGAAAGAGGAAATAAAGGTGGAAGTTGAGGATTCAAGCTAT
CTGATAATAAGAACTGAAGCAGCCAATGAAACAACAGAGCCAATAAGGAGCTTTATGAGG
AAATTTAGGCTACCTGGAATGGTGGATATGGATGGAATTTCTGCTAGTTATAGAGATGGT
GTTTTGACAGTCACAGTTCCAAGAACACTAGTGAGAAGGGGATTTTTCATTGAACCAGAT
GACTTGCCAGAAAGCATAGTGAATCTTGGTGCTAGTGCTGCTTGATTATTTTGTTTCCAA
ACAAGATTTGGTTGATATTAATACCTAATCTTATTATTATTAGTATTATTATTGGGTTTA
GGGAGGGGGGTTTCAAGATTGTGCTCTCTTTGAGATTATGTACATAAGTTAGATCAATGG
TAATCCTTAAACTGAATTTGCTGTCATTCCAAAAACTTTTGAGCTTGAAAAATACTATAT
TTGTAACAAAAGGATGGAGTGCAGTCTATTTACCCTGCTTTTACTTCCCTTCTCCTTTTC
ATGTTCCACCCTCCCATTTTTATTTAAAAGTAAAAGAACAAAA
