Microarray Probes on PGSC0003DMT400042004
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_21978_PI426222305 |
JHI_St_60k_v1 |
TCAGAGTCCGAAGCTGTTGATGTCATGGTATCACTAATGAAAGCAATAGCGCACTGTCAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400042004
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400042004 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G08650.1 |
+2 |
8e-98 |
296 |
149/278 (54%) |
phosphoenolpyruvate carboxylase kinase 1 | chr1:2752206-2753232 FORWARD LENGTH=284 |
Transcript Sequence (1126 bp)
>PGSC0003DMT400042004 1126 pgsc_dm_v3.4
TCTAAACGAAAAAAATAGGAGTCAGAAAAGTAGAGAAAAAAACAAAACATACGGAATGAG
TGAGTCACTGAAGCGAAATTATTGTGTGGGTGAAGAGTTAGGAAGGGGACGATTCGGCAC
CGTTTTCAAGTGTTACTCGCCGGCGACCGGTGAGTCATTCGCCGTCAAGTCTATCGACAA
GCGCCTAATCGCCGATGACGCCATAGATCGACAATGTCTTTACAACGAAGCGAAAATTAT
GCACTTGCTTTCGCCCAATCCTTATGTTGTTCGTGTTTTCGATATCTACGAGGACGATAC
TCACCTTGATATGGTTCTAGAGCTCTGCAACTCCGGCGATTTGTTCCAACGCCTCAGTAG
TCAACCGGTTTTCTCAGAGTCCGAAGCTGTTGATGTCATGGTATCACTAATGAAAGCAAT
AGCGCACTGTCACCGTCTCGGTGTAGCCCACAGGGATATCAAGCCGGATAACATTTTATT
TACCGACTCGAACGAACTGAAATTGGCTGATTTTGGATCGGCGGAGTGTTTCCATGAGGG
ACAGCTGATGAGCGGCGTGGTTGGAACGCCGTATTATGTGGCGCCAGAGGTTTTAGCTGG
GAGAAACTACAGTGAGAAGATCGATATTTGGAGTGCTGGTGTTATTCTGTATATAATGCT
TGCCGGAGTTCCACCTTTCTTTGGTGACTCGGCTACAGAGATCTTCGAGGCTGTGCTCAG
AGCTAACCTTAGGTTTCCGTCTAGGATCTTCCATTCAGTTTCGCCGGCGGCGAAGGATTT
GCTTCGGAGAATGCTCTCTAAAGACGTTTCTAGAAGATTCTCTGCTGAACAAGTTCTCAG
GCACCCATGGATGACTAGCAACGGAGAAATCAGAACAGTTGCGCCATTTTAGCTTCGAGC
AATCAGTTCTTCTTGGATGTAGATATAGTAAGTGAATATAATATGTACAGCTACCAATAT
ACCCTGGTCTAAATTGATTTGCTTCCACACAAATCAATTTGGAGTCGAGAGGTAACTGTA
GATGCATTAAATCCCCCATTGTTTTGTGAGGTTTTAATGCATCTTGTGAGATAATGAATA
AATCCTCTTTTTCCTTATTTGTGATCTTATCCAAATTTGGCAGTAG
