Microarray Probes on PGSC0003DMT400041940
Probe ID | Chip | Probe Sequence |
---|
CUST_22047_PI426222305 |
JHI_St_60k_v1 |
CCTCAATTATGTGGAGTCAAGGAGTGTGTCACATAAGCCAAAAAGTGTGCAAAATTACAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400041940
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400041940 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G43860.1 |
+3 |
5e-20 |
85 |
42/79 (53%) |
chlorophyllase 2 | chr5:17630492-17632184 FORWARD LENGTH=318 |
Transcript Sequence (522 bp)
>PGSC0003DMT400041940 522 pgsc_dm_v3.4
GCAAAAGTAGGAAAAAATCTATATGTTAAAACAACAGAGTACAGAGTAAAAAAGAACAAA
CAAAAATGGTGATAACTAGCACTTCCTCTGTTACTTGTTCTACTGTTTTTGATATTGGAA
ATTATAAGACTAAGTTGTTGAAAATTGAGCCACAGACATGTACCAAACACAATTCTCCTC
CAAAAGCTCTGTTAATTGGGACCCCATCAGAAGCAGGAAACTTCCCAGTATTGATATTTC
TTCATGGCTATCTTCTTTACAATTCTTTCTATTCTCAGCTTATTCAACATCTTTCTTCTC
ATGGCTTCATTGTTGTTGCTCCTCAGGTTCCTTCCTCTCTCTTATTTTCGCTTTTCTAGT
CAAGTGTGCTCCAAGAAATTGATATTTTTGTACACCTTTTTGACTTATTTCGCATCCAAA
CATCTCTCATGTGCCTCAATTATGTGGAGTCAAGGAGTGTGTCACATAAGCCAAAAAGTG
TGCAAAATTACAAAAAAGAAAGAAAGTAGATGTTTGAGGTAA