Microarray Probes on PGSC0003DMT400041410
Probe ID | Chip | Probe Sequence |
---|
CUST_30912_PI426222305 |
JHI_St_60k_v1 |
TACTGGTGTCTTGACAGAACAACAACGGCTCATATGCCGTGGAAAAGTGTTGAAGGATGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400041410
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400041410 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G25270.1 |
+1 |
2e-37 |
143 |
74/109 (68%) |
Ubiquitin-like superfamily protein | chr5:8757577-8762002 REVERSE LENGTH=658 |
Transcript Sequence (1137 bp)
>PGSC0003DMT400041410 1137 pgsc_dm_v3.4
ATGGTTAGCAACGGTGCTGAAGATGTGCAGATTTGTGGAAGTGGTGAGGCTGAATGTCCT
GAGACCACAGTGCCAGTCCCTGCATTGAAGGAACAAATTGCGACAGTTACTGGTGTCTTG
ACAGAACAACAACGGCTCATATGCCGTGGAAAAGTGTTGAAGGATGACCAGCTGCTTTCC
GCTTACCATGTGGAAGATGGTCACACTTTGCATCTGGTTGTGAGGCAACCTTCATCAGAC
AGTACCCCTGATCCCCAAGCAACTGCTTCTGCATCAAGTGCTGGGTACAGTCAAGGAAAC
CGAGTGAGTCCTGGTGTGGTAGTTGGAACCTACAGCTCATCTGATCATGGAGATGGAATT
TTCCCTGATTTGAATCGCATTGTAACAGCTGTGCTTGGATCTTTTGGAATTGCAAGCGCT
GGCGGTGGGAATGCGGGGATTGATCTCCATGCCAAGCTATCACCTTCTGTGCTAGCTTTC
ACCCTTATTTCTTTCACCTTTTCAGAATTTAGAACCACAAATTTTACATGGGGGAAGAAA
GGATTTACCTTTACGCTAGATTTAAATCGTATGACATCTCTAAGTTCAGTTCTAGGTCAG
GAACATGGTTTGAATGGACTGAGCGTAGCAGGTATGAGGAAAGTAACTTTAAGCCTTAAA
GTCATGAGATGGCTAGTCCAAGTACTTATTGAAGCTTCAAAGGAGCAAAGAATGACAGTT
GGGAGATGGAAAACAAAGCATCACTTTGCTGAATTCTTTTGCACTCTTAAATACAATGAG
CATGGTAGGTATGCCAGGTTTATTGCAGTACAAGGGGGCAGCAGGTCAGTTATTATAACT
CCTGAGACTACATTAAATGATGCATGGATAGAAACAGCTCAGAAAGTTACAAAATTCATT
GGGGTCTCAGAAAGGGGTGAGAAAACAGCAGTTATTGGACAACATCAGATCAAATCTTCT
TTTGTTGAAGCCAACAGAAGCAATAAATGGGAGACAGAAGCAATTAAAGGTTTGACACCA
CAGATCACTCCCTGCAGAATCACCCTCCCTGGAAGCTCTATAGTTTCAGAAGACGATGTG
CTTGGCAGATGTATTGTGGGGAAACTTTTGGACATGAGCAAGAAACGCCAACTCTGA