Microarray Probes on PGSC0003DMT400041342
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_51321_PI426222305 |
JHI_St_60k_v1 |
GATGATGACTTTGATGGTATTAGACTTGGTCCAATTGATGACTTTTATGGTGTTGTGATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400041342
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400041342 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G25600.1 |
+2 |
7e-69 |
215 |
122/161 (76%) |
Calcium-binding EF-hand family protein | chr3:9307367-9307852 FORWARD LENGTH=161 |
Transcript Sequence (981 bp)
>PGSC0003DMT400041342 981 pgsc_dm_v3.4
GTTTCCTCTCTCTTTCCCTCACACGGTTTCTCATTATATCATTATATCCAAAAAAAAAAC
ACATCTCAAACTTCTTCATTTCTCTCCTTCTATTTTCTTCAAAATATCGAGGTATTATTA
CGAGCTCAATAATAATATATACGTTCGTATAATGGCTAGCCTTCAATCTGATGAACAACT
CAAACAACTCAAAGAAATATTCGGACGATTCGATCTTGATCATGATGGAAGCCTCACACA
ACTAGAGTTAGCCGCGCTTCTTCGTGCCCTAGGGCTCAAACCAACGGGCGATCAAATCCA
TACATTATTAGCAAATATGGACAATAATGGCAACGGGTTCATCGAATTCGATGAACTCGT
AAATGCCATTATGCCTGATATGAATGCAGAAATTTTAATAAATCAAGAACAATTAATGGA
GGTTTTTCGATCGTTCGATCGAGACGGTAACGGTTACATAACGGCTGCTGAGCTGGCCGG
GTCAATGGCTAAAATGGGTCGCCCGTTAACGTATAAGGAGTTATCTGATATGATGCAAGA
AGCTGATACTAATGGTGATGGTGTTATAAGTTTTAATGAGTTTGCTAATATTATGGGAAG
ATCTGCTGCTGATGTTCTTGGATTAACGGTTTCGTAATCAGAAACGGATTCAGGATTTGA
ACTTTACAGGTCGGGTTTTGATTAAATTTTAGGTTTGAAATCTATTACTGTATGTATTAT
TTAACATAGAATTTAAGTCAAGGCTAGTGATTCGAATAAATTCCTAGCTCTTTTACTAGA
TTCGCCTCTTGATTAACCGGTATCTAAGAGCGGTTTTCCGATATGTTTTTATTTTTATTT
TTATTTTTAATTGTGACATTAATTAATGTTAGAAATTGGTGTTGGTTGATGAGTTGTAGA
TGATGACTTTGATGGTATTAGACTTGGTCCAATTGATGACTTTTATGGTGTTGTGATTTA
ATTTGTATTTTGATGTGCGAG
