Microarray Probes on PGSC0003DMT400041331
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47157_PI426222305 |
JHI_St_60k_v1 |
ATTCGAAATACTCTATGCATCGGACTATGATGGTGGAGAAGAATCGAAAGTCCAATGAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400041331
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400041331 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G17500.1 |
+2 |
8e-59 |
193 |
121/227 (53%) |
ethylene responsive element binding factor 1 | chr4:9759405-9760211 FORWARD LENGTH=268 |
Transcript Sequence (973 bp)
>PGSC0003DMT400041331 973 pgsc_dm_v3.4
CCTCCCTCATACTTCACCAATCCAAATTGAACACCAAAAACCTCATAAATCACTAGAAAA
AACTAAAATTCAAAGCAAAATGGATCAACAGTTGCTACCGACGAACTTCCCGGTGTATCG
CCGGAATTCAAGCTTCAGTCGTCTAATCCCCTGTTTAACTGAAACATGGGGAGATTTACC
ACTAAAAGTCGACGATTCCGAAGATATGGTAATTTACGGTCTATTAAAGGACGCTCTTAG
CGTCGGATGGTCGCCGTTTAGTTTCACCACCGGCGAAGTAAAATCGGAACCGAGAGAGGA
AATTGAGTCGGCGCCTGAATTTGTACCTTCTCCGGCGGAGAAGACGGCAGCTCCGGTGGC
TGAAACACCCAAGGGAAGACATTATAGAGGCGTTAGACAGCGGCCGTGGGGGAAATTTGC
GGCGGAGATTAGAGATCCGGCGAAGAACGGAGCTAGGGTTTGGCTTGGAACGTATGAAAC
AGCTGAAGAAGCTGCTATTGCTTATGATAAAGCTGCTTATAGAATGAGAGGATCAAAAGC
ACATTTGAATTTCCCGCACCGGATCGGTTTGAATGAACCGGAACCGGTTCGAGTTACGGC
GAAAAGACGAGCATCGCCTGAACCGGTAAGCTCGTCGGAAAACGGTTCAATGAAACGGAG
AAGAAAAGCCGTTCGGAAATGTGACGGAGAAGTGGAGAGTAGATCAAGTGTTATGCAAGT
TGGATGTCAAATCGAACAATTGACAGGTGTCCATCAACTATTGGTCAGTTAAATAGCCGG
CAATTTTCCGAACGCGAAATACTTTGTGCATATTTTCCCCGAACCCTTAAATAAATTCGA
AATACTCTATGCATCGGACTATGATGGTGGAGAAGAATCGAAAGTCCAATGAAAAAAATT
ATCGTGATAGGGTTAATCCGAAGTTGTAAAAAGTTTGATTTTCATTAATATTATCTTTGA
TCTTTGATAATTA
