Microarray Probes on PGSC0003DMT400041328
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47132_PI426222305 |
JHI_St_60k_v1 |
GAAGAAAAGCTATTCTGAATTTTCCGTTGGATGCCGGAAAATCTGGTGCTCCGGCGAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400041328
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400041328 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G07580.1 |
+2 |
2e-43 |
151 |
74/114 (65%) |
Integrase-type DNA-binding superfamily protein | chr5:2399525-2400349 FORWARD LENGTH=274 |
Transcript Sequence (845 bp)
>PGSC0003DMT400041328 845 pgsc_dm_v3.4
TAGAGACTCACACAAACATAAGCACAAACACCTTCACTACAAAATTTTCAGACTCATAGA
GACATAAACACAAACACCTTCACTGCAATTCTCAAAATACTGCAATATGACGAAACAAGA
TGAAGGTTTAACATTAGAACTCATACGACAACATCTCCTCGAAGATTTCACAACTACAGA
ATCATTCATCAACAGTCTCAATTCTTGTTTTTCCGATCAAATCTCCTCCTCCTCCGACAT
CTCCCCTGTTTTCACTTCAGTAAAAACAGAGCCATCTACATCCAATTCCCTTTCAGATTC
ACCCAATTCCTCATACCCAAATGAACCCAACTCCCCAATTTCCCGTTACTTCAATCTCCA
CTCCGATTTCCCCGAATTCAAAATTGATTCAGATACCATCCTCAGTCCAGTTTCCGACAG
CTCCGCCGGTTCTAATGAAGACAATAATAAGAAGAAGAATTACAGAGGGGTAAGGAGAAG
GCCATGGGGGAAATTTGCGGCGGAGATAAGAGATCCAAGTAGAAAAGGATCGAGGATTTG
GTTGGGTACTTTTGATACTGATATGGATGCTGCTAGAGCTTATGATTGTGCAGCGTTTAA
GATGAGAGGAAGAAAAGCTATTCTGAATTTTCCGTTGGATGCCGGAAAATCTGGTGCTCC
GGCGAATATTGGCCGGAAAAGGAGAAGAGAGAACAAGATGGAATTGGTGGAGATGATTAA
TTTGTAATTTGCATGAAAGTATGTTAATTACTTACTTAATCCTCTTTAAGTGATGTATTA
AACTCCATTACATTATAATTAATAGAGTTTTTTTTCCAACATATTATTAAAATATAATAA
AAAAT
