Microarray Probes on PGSC0003DMT400040868
Probe ID | Chip | Probe Sequence |
---|
CUST_27118_PI426222305 |
JHI_St_60k_v1 |
AGGTGGTTGCTGCTCCCTAGAGAAGACGAATAAATGGAAGTTAAAAACTGATCATTTGCC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400040868
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400040868 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G05340.1 |
+3 |
5e-136 |
400 |
207/297 (70%) |
Peroxidase superfamily protein | chr5:1579142-1580819 REVERSE LENGTH=324 |
Transcript Sequence (1549 bp)
>PGSC0003DMT400040868 1549 pgsc_dm_v3.4
GTTCTTTACTTTTATCTTAGTATTTGCTCTAAAAGATATTAAATTTGTTATATTCAAGCA
TTATGGTGTCTCTAAGTAGGAACCTCATTTTGGCATTTTTGTGTGTTTTATTGGGATTTG
TTTGCTTTAGCAATGCCCAATTATCAGACAATTTTTATGGGACGTCGTGCCGTAATCTGC
AGACAATTGTAAGAAACGGAATGATACAAGCCGTGAAGAGAGAGGCCAGACTTGGTGCCT
CTATTCTTCGCTTGTTCTTCCATGATTGCTTCGTTAATGGGTGTGATGCATCAATACTAC
TGGATGACACATCAACATTTACAGGAGAAAAGAATGCAAACCCAAACAGGAACTCAGCAA
GAGGATATGAAGTGATAGACACCATTAAAGCTCAAGTTGAATCTGCTTGTCCGAATGTTG
TCTCTTGTGCAGATATTCTTGCTCTTGCTGCTCGACAAGGCACCGTGCTCCTAGGAGGGC
CATCATGGGCAGTACCATTGGGCCGAAGAGACGCAAGGACCGCAAGCCAAAGCGCCGCCA
ACACCCAAATCCCCGCACCATTTTCCAGTCTTTCAACTTTACTCTCCATGTTCTCCGCCA
AAGGCCTAAATGCCCGTGACATGACGGCACTCTCCGGCAGCCACACGATCGGCCAAGCTC
GGTGCACCACTTTCAGAAACCGGATCTACAACGACACCAACATTGACACGCAATTCGCCG
CCACGCGCAGGGCTACCTGCCCTGCTTCTGGCGGCGACGCCAATTTGGCCCCGTTGGATA
TCCAGACGCCAAACCGGTTCGATAATGATTATTATCAGAACCTAGTGGTTCGGCGTGGGT
TGCTTCACTCGGATCAGGAATTGTTTAACGGTGGATCTCAGGATGCGTTGGTGAGGAGTT
ATAGTAATAATGTTGCGAGTTTTAGAAGTGATTTTGCTGCAGCTATGGTGAAGATGGGGA
ATATTAGTCCACTTACTGGAACTAATGGAGAGATTAGAACAAACTGCAGGGCTATTAACT
AGCTAAGTTATTAGTAATTTAAAATTGTCATATATAAACTTTGATTACTAGTAAGTTGTA
TCACCTCCTCTGTACCAAATATAAGTGTCATAATTTAACTAGACACGAAGTTTATTAAAT
AAATGGAGATTTTTGAATTTTGCGATTTTAAATCTAAAATGTGTGTAATCTTAAACTTGT
CAGTTACCAGAAAAATTCAACATTTGCAGAGAGCTGAAAGTTGATTAAAAATACATCACC
AAATCCATATTACTAAATCTGCTGTTTTGTGAGATATACGACCAAATAGAAAGTTTTTTA
TTTTACTGATACATGCATGTTGTTTGTTACTTAACCAAATCCATACTAAAATCCCAGAGT
TTCTTAGCCAAATCCATGTTCCTAGCCTTCTTCGATGGGGTGGCCAAATTGTTGTCCTGA
AAATATTCGCCACTCACCCCCTTCACTTGTGGATTCAATGCTATATAACAGGTGGTTGCT
GCTCCCTAGAGAAGACGAATAAATGGAAGTTAAAAACTGATCATTTGCC