Microarray Probes on PGSC0003DMT400040330
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_30984_PI426222305 |
JHI_St_60k_v1 |
AATATGCTATCCATTTCAAGGCTGAGGAATCAGCGAGGAGATGGAAGTAGATTGGGCTCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400040330
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400040330 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G70180.2 |
+2 |
4e-18 |
88 |
64/153 (42%) |
Sterile alpha motif (SAM) domain-containing protein | chr1:26426768-26429097 FORWARD LENGTH=460 |
Transcript Sequence (2692 bp)
>PGSC0003DMT400040330 2692 pgsc_dm_v3.4
ACCACCACCCCACCCCCACCCCTTCTACATCTCTTGCAGTGAAACCCTAAAGCCCGATTT
CAAGTTTCATATCGGAGCTGCTGTTTCGCCATTTCTGAAGGATTTTGATGGTATAGTTCC
GGCCTATACATTGATTTGCCGAGATAGGGGCTTCGGAGTTGTTAAAATGGCGGAGGCTTC
GAGTTCTCGAATTACAATCACCCTAGGACGCAGCGGTCAGGTGGTAAAGAAGGCAGGACC
TGTATTAGATCATCCCTTTCCTGATTCAAGGCCAGCAGTTGGGAGTAAACGGTCTGTCAG
AGATAGACTAGGTAGCATTGCAGATTCAACAACTGAATTCAATAATAAACGTCAGCGAGG
AGATGGAAGTAGATTGGGCTCTCGTGCCTCTAGTGGCATTGAAGATGGGCGGCTTGGTAA
AGATGACCTGCGATATAAAATCATGCGGAAAACTGCACTTGACCGAGGCCAAAGCAATGG
CCAGCAGAATGGGGTTGATCTTCGTGATTTCCTATCAAGGCCTGCTCAGTCTTCAACAGC
AAAACCTAGTTCACGGCAGCACATACCTGATCAGAGGGATAATAGACAACGAGTACCTGA
GCCGAGGGATAATAGAGCACGAGTACCTGAGCCAAGGGATAATAGAGCACGAGTACCTGA
ACCGAGGGATAATAGACCACGAGTATCTGATCCAAGGGATGATAGACAGCATATGCTTGA
TTCAAGAGGTTCTAGAGAATATTTGCCTGAAATCAAAGATTCAAGACAGTACATGCCTGA
AGCCAGGGATTTTAGAGGGCACCGTCCGGAGCTAAAGGATGGTAGGTATAATACACCCGA
GTCAAGGAGTGTGAGCATACTGGGACGAGCTCCCTTGGCAAGAAATGCAGATGCTTTACC
CATGATGGACTCAATAAGGAATTCTTATTCCCCCTGGACACTGGATCGTTTAAGGCGAAG
ATCACCAGATGGAGTTCATAGTTCTTCTAGAGGTATTTCACCACCAAGGAGAGGGGAGGA
ACTGCAGAGAAGACCTCCAGTGACGCCTTATGACGACCCGAGACTCAGTTCATACACAAG
GAAAGATGTCTCTGAGCTTTCACGCCCCATGACTTCTGCAGGTTACCTGTCAAACACATC
CCAACCTGCCGGGCCTGGAAAGACTGTCGCACCATTTCGTGCCCCAATCCCTCAATCGCG
GAGTCTAGTGCAGAAAAGTTCATATGCAGTACAATCTACTTGACTTTATGCCTTTTCTTT
GTTTCCTCTTTTACTATGTTGAGATATTGATAACTTAGATGATTATATGGTGAGATTTTC
TCCTGATAATCAAACATTATATTTATCCTATTCCCAGGGCTGCAAACTACTTCTGCCATC
AAGTATGTGAGCTCTGATAGTTGAAGTGCTATTCTGCATCACTTCCATACCAATATTAAT
TACAACAGATGCTCATAAACATCAAGTTGTTTTCTTGTAAAAACATATATTTTGTAGATA
AGAGTTGCTAAAAGAAAAATGGTTAACCTAGTCCAAAGTAATAATGAAAGAGGGCTTTGC
TTGTTTGTGATCATCTGTTATCCATTCTTGAGAATTATTACAAATGTCCCTTTTTGGATA
TTTTTTGGCTCTTCATATTCTGTGGTTGTGTTCTTTACAATCATTTTGGTGTTTGTGCAC
TTTGCACCTTCTTGACTTTATTCTTCTTTAAAAAATTATTCACATTTTAAGTAGACTAAC
CTCACTGGGTCCTGGAAAAATTTGATGTTGTATGGTGGAATTATGAAGCGTGTATTCTCA
TTCCCGATCAGAGATAAAGTGGTATGCTTAGCTACTGACATGATTAGACATTTTTACTTT
CTTGTCTGAAAAATTGGGCCATAGCCATGTCTTGATATATTGCATACTGAGCATGATGGA
TAACAATTGGAGGTTAAAAAGAACATAAGAAGTTAAAAAAATTTGGTTTACTCCTCTCTA
AAAGTTCTTTCTCCTTCCTTTAATGCAGGTTGAGGATCAACCTACTGTTGATAGCTTTTT
GCACTCGTTGGGTCTAGAGAAATATGCTATCCATTTCAAGGCTGAGGAAGTGGATTTGTA
TTCACTGAAGCAGATGGGTGACAATGATCTGAAAGAGTTGGGAGTTCCCATGGGTCCGAG
AAAAAAGATTCTGCTTGCATTAGCATCTCGTGCCAGGAGACAAGTATGATTACATGAACT
GATGCAATTCAGATACATTCTGGAGCTTTGACACAAAAACCATGAGAGCTGAAGTGAGAT
CTTGCAACTCTGCATATGCCTTGTAGTCTGTAGAGCATGTATTTTCCTTCTCGTTCTAGC
TGGGCGAATCTGTATGGATCAGTTGTTAGCCCCTTGTCGATTCTGTAGTTTCCTACATAG
GGCAAAATATTTTGCCAAAAGCAGTCTGATTCTTTTGTTGTTTGCTACTATTTTGTTTTT
GTGCTATCCTCATTGTTATGGAATTACACACCAGTAAACCCTCCGGCATGAAAACAAAAA
AGTTTGTGACGTTAAACATACCATCTGGTGCTGATACCCATTTAAGGTATTTTTCAACCC
GTTGTCGATCAGCTTTCTTTTTTGGTATGAACTACATGTAAGATATGGAAATGCACGAGT
GTCTGTGCGAACTATTTTCGTCTTGAACTATGTATGTGTGTGTGTGCGCTCG
