Microarray Probes on PGSC0003DMT400040284
Probe ID | Chip | Probe Sequence |
---|
CUST_30963_PI426222305 |
JHI_St_60k_v1 |
GGCTATTGCAATTGGAACTATCTCCAGTCTTATTGAGTAAACAAGGAATTTGAACAACAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400040284
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400040284 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G52190.1 |
+3 |
3e-180 |
529 |
263/566 (46%) |
Major facilitator superfamily protein | chr1:19434671-19438673 FORWARD LENGTH=607 |
Transcript Sequence (1952 bp)
>PGSC0003DMT400040284 1952 pgsc_dm_v3.4
GAGTAAACAAGGAATTTGAACAACAAAGAAAGAAAAGAAAGAAAATGGGGAATAACCCAG
AAGAAGAAGAGTTTTTACTGAATCACTCACAAAATTCAACAAAGGGTGGTGTAAAAACCA
TTCCTTTCATCATAGTGAATGAATCATGTGAGAGAGTAGCAAGTTTTGGTTTGCAACCAA
ATATGATACTCTATATAACAAAATTTTACAACATGGATGCTGCTCGTGCTTCAGTTTTGT
TGAATTTATGGTCAGCACTTTCAAATGGATTGGCTATTTTTGGGGCTTTTATTTCTGATT
CTTACATTGGAAGATTTAGGGCTATTGCAATTGGAACTATCTCCAGTCTTATTGGAATGA
TTGTTCTATGGCTCACCGCAATATTTCCACAAATCAGGCCGTTACCCTGCGGTCAGGATC
AACTTGATTGTAACGCAGCAACAGCACCCCAACTTGCTGTAATTTTGTCTTCTTTTGGGC
TTATTTCCATTGGTGCTGGTTTTGTTAGACCTTGTTCAGTAGCATTTGGTGCTGACCAAT
TGGAGAACAAAGAAAATCCAGATAACGAAAGAGTTATGGATACCTATTTCAACTGGTTCT
ATGCTAGTGTAGGAATTTCAATCTCTGTTGCAATTACTGTAATTGTTTATATACAAGTGC
AGTTTGGCTGGCAAGTTGGTTTTGGTGTCCCTGTTTTGCTCATGGTTTTAGCTGTTTCCA
TTTACTTGATTGGATCTCCTCTTTATATCAAAGCAAAACCTAAAGGGAGTTTGTTCACTG
GATTGTTTCAAGTAGCAGTCGCAGCCTTCAGAAAAAGACATATCAATGTTCAGTTGAATT
ATAGTGATGACTGCTACTATAAAGCACCTGAATCAAAGCTCCTGAAACCATCTATTGACT
TCAGGTGTTTGAATAGAGCTTGCATAATTGAAGATCCTCACATGGACTTGAAACCTGATG
GAAAAGCTTCAGATCCATGGAGTCTCTGCTTTGTGGAACAAGTCGAAATAATGAAGTGTT
TTCTTAGAGTTCTTCCCATGTGGTCCACCTGTATTATGCTTCTTGTGTCGTTCGGTCAGC
CACTTTCGATATATCAACTACTGACCATGGATAGACACATTACCCATCAGTTTGAAATCC
CTGCAGGATCATTTGGCATGATTACCGTTCTTTCTTTGACAATCTGGATTGCTTTTTACG
ATCGTGCTTTGGTGCCTTTACTATCAAGGTATACTGGACTGCCGACTGGGTTAAGTACAT
TTTCCAGAATGGGGATTGGCTTATTTCTCGGCATTGTTGCTACAGCACTTTCAGCTATAA
CAGAAACCATACGACGCAATAAGGCAATCAATGCAGGGTTTGAGGATGACCCGAATGCTG
TGTTAAACATGTCCTCTATGTGGTTTGTACCACAGTTGGCACTATATGGGGTGGCTGAGG
CTTTGAATATGGTTGGACAGATTGAGTTCATATACAGTCTATTTCCAAAAACCATGTCCA
GCTTTGCAGCAGCTCTTTACACTTTTGGCCTTGCGCTTGCCAGCTTAATTAGCAGTCTCT
TGGTGAGCATGGTGGATAGTATTACCTCAGCTGGAGGCAAGACAAGCTGGCTCGCGACCA
ACATAAACAGAGGTCATCTGGATTACTACTGCTGGCTAACGACTTTCTTATGTGTGATTA
ACTTCCTCTATTTTCTAGCCATTTGTCGGTTTACTGATCAGCATCACCATGATGGTAGGA
GTAGCTTATTTCCTGAGGTAGAAGAGGAACACTCCGAGAATAGGCGTTTCCATGGTGCTT
AATGTGTACGCTATGTTTATGTTTGAATCATTTGCATGTATTGTAACTTCTCTTGAATCC
TTGACCTAAAATAAATTGAGGCTTCTTTCTTTAAGACAGAAAATGAGTGCCAAAAAAACT
CACATTGTATTTGGCCAAAATCATCCTTAAAC