Microarray Probes on PGSC0003DMT400039518
Probe ID | Chip | Probe Sequence |
---|
CUST_22489_PI426222305 |
JHI_St_60k_v1 |
ATTTCTGACTTGCAAGTGTATAAAATGCAAACAGTTCTCCGGAAACTATTCAAATGCTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400039518
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400039518 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G73390.1 |
+2 |
1e-85 |
270 |
130/152 (86%) |
Endosomal targeting BRO1-like domain-containing protein | chr1:27591079-27594148 REVERSE LENGTH=419 |
Transcript Sequence (1221 bp)
>PGSC0003DMT400039518 1221 pgsc_dm_v3.4
GGGCATCTCTGAATGTCACACTTATTGCGATACGGGTAACTTGTTTATTCCCAACTAGCT
GGCATTGGGTATGCGGATCATTTGCTTCCATTGGAGTCCTTGGTCCTTTAAACTCCTTCC
CCTAACATAGTAATAGAAAGAGGAAAATAAAGCTGTGTTACTTTACTCCAGGTAGTGTCT
GAGATATCAACTACTTTGTTTTTTTGTTACCATGCAGGCTCAAGATAACATCATGAACCT
TCCATTATCAAATGGTTGGGGAGAAAAGCATAGGCTTTTCGTGAAGTGGAAATATATTGA
AGCCAAGGCTTCAGCATACTATTATCATGGTCTAATCCTTGACGAAGGAAACACAGAAAA
ATCTCATGGAATGGCGGTAGCTGCCCTGCAAGCAGCTGATGAGTATCTTAAAGAAAGTAA
GAAGGCATGTGAGGCTTTCAATGCAGCCATTCCTCTCTCCAGAAATCCTCCACTTTGGGG
AACGATGAAGTATCTTGCCGAGAAAATCCCAAAGGACACTTCGAGCAAGGTGCGGATCAA
CAGGGATTTGTACTCTTATGAAAAGATCATGGAAACAGCCCCAACGCTGCCAGACTTTGC
ATTGGCTCTCAAACCTGATGAATATCAGCTTCCTCATGTGGATGCATCTTGGGATGATGA
AACTTACAGGCAGGGGACAGCTTAACCCGAACAAGCTCAAAGGGTGACTTATTCAGCTCA
TCAGATTTCAGACTCTGGAAAATCCAGACTGCTTGAAAATGCAGCATGACTGTCGTCATA
TCTCCAAGATATCAAACTCTTGCTATTCGCCAAAGGTCCCCTCTTTGCTGCACCTCTAGT
TGAATGTGATCTCTATTTCTTCCAGTAAATTTAATCTTTATTTCCTTTTTCCAATTAGAT
GTATAGTCAACCCTGTGAGTGAGTTCTGTACAAGTCGCTTTGCTTTTGTTTGTAATCTTT
GATCAACAGGAAAAAGGATGTATTTCTTTCCCAGCCTACCAAATAATTTCTAGTTCCACT
TGTCCACCAACATGAAGCCAGAACCAATTGTGCAAGTTGTTTGAAAGAAAATGCTTTTGT
ATAAATTCCACAATTTGTGTCTTTTGAAGAAGCTTATTAGCTAAAAGAACCTCCTCTGTA
TCTTTACTTTTTTCAATTCCAATTTCTGACTTGCAAGTGTATAAAATGCAAACAGTTCTC
CGGAAACTATTCAAATGCTAG