Microarray Probes on PGSC0003DMT400039507
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22473_PI426222305 |
JHI_St_60k_v1 |
AATACTTCTGTATGTAGCTGCACATTTCCAAGACGATGATCCCAGACCAGTAATAGCATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400039507
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400039507 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G17810.1 |
+1 |
2e-122 |
357 |
186/267 (70%) |
beta-tonoplast intrinsic protein | chr1:6130209-6131442 FORWARD LENGTH=267 |
Transcript Sequence (1034 bp)
>PGSC0003DMT400039507 1034 pgsc_dm_v3.4
GTTTTATCAGATTAAGATAAGAATCTTGATTTACATATTTGATCTGTAGTACTAAAGGTT
TTCAACATTGACAGCAGATTTATTGTAGTTATGGCTATGCCAGCTAGGAGATATGCTTTT
GGTAGGGCGGATGAAGCTACTCATCCTGATTCCATGAGAGCCACCTTGTCTGAACTCTTA
TCCACCTTCATCTTCGTTTTCGCCGGTGAAGGCTCTGTTCTTGCTATTGACAAGTTATAT
CCGGATACGGGGTTAGGTTCATCAAGACTGATAGTGATAGCGCTGGCGCATGCGTTTTCC
TTCTTTGCAGCTGTGGCTTCTAGCCTGAATGTTTCTGGAGGACATATCAACCCAGCTGTT
ACCTTTGGTTCACTTGTGGGAGGCAGGATTTCTGTTGTTCGTGCTATCTATTATTGGGTT
GCTCAGCTTTTTGGTTCTGTTTTAGCTTCTCTTTTGTTGAGGCTTGCTACAGATGGCTTG
CGGCCACGGGGATTCTCGGTTGCAGCAGGGGTGGGCAACTTGAATGCACTTGTGATGGAG
ATAGTGATGACATTTGGACTAATGTATACAGTATATGCAACTGCTGTTGATCCAAGGAGG
GGAAGCTTGAGCACCATTGCCCCTCTTGCCATTGCATTCATTCTGGGGGCAAACACCCTG
GTGGGAGGGCCTTTTGAGGGGGCATCCATGAACCCAGCAAGGGCATTTGGACCTGCTTTA
GTGGGTTGGAGGTGGAGGAACCATTGGATCTACTGGTTGGGCCCTTTCGTTGGTGCAGCC
CTGGCTGGACTTATATACGAGTATGGGATCATTCAGCATGAAACCGTTCCACGCCCGACT
ACCCACCAGCCCTTGGCACCAGAAGATTACTAGTCTCCTTCATTTGTGAATAAAAAAGGA
TTGTGCTTAAAAACTAATGTGATGTTTGTAGTCCAGTTTATGGTTGCTTTTTAATTCCAT
TTTCTGCGTTTAATACTTCTGTATGTAGCTGCACATTTCCAAGACGATGATCCCAGACCA
GTAATAGCATGAAT
