Microarray Probes on PGSC0003DMT400039423
Probe ID | Chip | Probe Sequence |
---|
CUST_22394_PI426222305 |
JHI_St_60k_v1 |
GAAGGTTATGCAGATGTAGAATGAAGGAAGTGAACGCACAGCATATTATTACTTACAATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400039423
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400039423 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G52180.1 |
+1 |
2e-156 |
452 |
237/380 (62%) |
dual specificity protein phosphatase (DsPTP1) family protein | chr3:19349884-19353459 REVERSE LENGTH=379 |
Transcript Sequence (1407 bp)
>PGSC0003DMT400039423 1407 pgsc_dm_v3.4
AACTGATTAAAAAAAACAAAAAGGAATTAAAAAATTGTTCATCTCATTTCTGTATCACAC
TTGATCAGATTCATATTATCCTACAAATCCATTCATTTTCCCAAAATGAATTGCCTTCAG
AATCTTCCCAGATCCTCTGGTTTACCGCTGAGAAGCTTCACAGGCAATTCAAGAAAGCCT
TCTCCCACTGTTGTTTCACTGGGGATGACAAAATTTGCTGAACAGCGTCTAAGTATTGTG
GCACAGGTAGTATCTGGTCCTGAATCTAGTACAGCAAAGGACAAGGATGCGGGAAAATCT
GATACATACAGTCATGACATGACTGCAGCTATGGGAGCTGTCTTAACCTATAGGCATGAG
TTAGGAATGAACTACAACTTCATCCTTCCAGATTTGATTGTTGGTTCATGTCTACAGACT
CCTGAGGATGTGGACAAGCTTCGCAGTATTGGAGTTAAAACTATTTTTTGCTTGCAACAA
AATCCAGATCTCGAATATTTTGGGGTTGATATCGAAGCAATTTGTGAATATGCCAACAAA
TGTGGTGATATTGAACATTTGCGAGCCGAAATAAGGGATTTTGATGCATTTGATTTGAGA
TTGAGGCTTCCAGCCGTAATAAGAAAACTGAACAATGCCATCAATAGAAATGGGGGTGTG
ACTTATATACACTGCACAGCTGGACTTGGCAGAGCACCTGCAGTTGCGTTGACATATATG
TTCTGGGTTCAATGCTATAAGCTTACTGACGCTGTCAGTTTACTCATGAGCAAACGTCCC
TGCTTTCCGAACCTAGATGCCATCAAAAGTGCCACAGCAGACATCCTTACAGGCCTTAAA
AAGACGCCTGTCACGTTGACATGGCGTGGTGATAATTGTACTACAGTGGAATTATCTGGA
CTTGATATTGGCTGGTGGCAGAGAATACCCTTAAAATTTGACAAGGAACAAGGTTTGTGG
ACTCTCCAGAGGGAGTTACCAGAAGGACACTATGAATACAAGTACATTGTTGACGGTGAA
TGGATATGCAATGAATTTGAGCCGATCACTTCTCCCAACAAAGATGGATATGTCAACAAC
TATGTAGAGGTTCTTGATGAAACTCCAGACAACATCACCAGTGCAGCAATACGGAAGAGG
TTCTCCGGTGATGACCCTGATCTTACTTCATACGAAGGGCTCATAATCGGACAATTTCTC
GAAGGTTATGCAGATGTAGAATGAAGGAAGTGAACGCACAGCATATTATTACTTACAATT
ATAAGTGTATAATTGTAAACAAAGCCAATAATCTGCTATAACTCATGCAGTGTAATTAGG
ATGTAGTTGTTTGTAGTATCAATAAGAGTTGTATGATACGTTTACAAGGAATGAAATGTT
GTAATGAAGTAACATGCTCCATCTTCT