Microarray Probes on PGSC0003DMT400039230
Probe ID | Chip | Probe Sequence |
---|
CUST_22367_PI426222305 |
JHI_St_60k_v1 |
GTCTCATTCATGAGCTCTACACAATGGTAAAAGCATATACTAGCTATACATTTGAGGAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400039230
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400039230 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G48460.1 |
+3 |
6e-149 |
434 |
212/365 (58%) |
GDSL-like Lipase/Acylhydrolase superfamily protein | chr3:17949496-17951082 FORWARD LENGTH=381 |
Transcript Sequence (1462 bp)
>PGSC0003DMT400039230 1462 pgsc_dm_v3.4
CAGACTTTCCCAAAGTTCACAACCAAAAAAAGTGCTCTCTGACTCTGAGGTGTGAGGCCA
TGGCTATTTTCTCTAGAGTAGTGATCCCTTTGAAAATCACCCTCATCATATTGACCACTA
CACTGATCTTTTCCCCTTCAGCAATCTCCTCTGCTTTCACTCCCAAAAAATTCAAAAAAA
TCTATGCATTTGGGGATTCCTACACAGACACAGGCAACACACACTCAGCCACTGGCCCTA
GCTCTTTCAATTACGTATCCAATCCTCCTTACGGAAACACATTTTTTCACCATCCAACAA
ACAGATACTCCGACGGTCGATTAGTCATCGATTTCGTCGCGGAATCACTGTCGTTGCCGT
TTTTACCGCCTTATCGAGATCCGAAAGCGGATAGAACTTATGGTGTTAATTTTGCTGTTG
CTGGTTCTACTGCTATAAGGCACAGATTTTTTGTGAAAAACAATATCACTTTGAATGTGA
CTCCACAATCGCTTCAAACGCAGCTCACGTGGTTTAACAGGTTTTTAGAGAGCAAAGGTT
GTGTGAATTCTACAACAACACCGCAGCAGTGCGAGGCGTTGTTTAGTGATGCTCTGTTTT
GGGTAGGTGAAATTGGGGCTAATGACTATGCGTATAGCTTTGCATCTAGTGTTTCACCCA
ACACAATTCAACGGCTTGCCACCAGAAGTTTCACTGGTTTTTTACAGGCATTACTGAACA
AGGGAGCAAAATATGTACTTGTTCAAGGTCTTCCACCAACAGGTTGCTTAACACTGTCCA
TGTATCTGGCACCTGACACAGACAGAGATGACATGGGATGTGTGGAAAGTGCAAACAAGC
ACAGCATCCTCCACAACAGCATCATCCAAGCCAAATTAGATTCATTCAGAAAACAGTTCC
CACAAACTGTCATTGTTTATGCAGACTACTGGAATGCATACAGCACAGTTGTGAGAAATG
CAAACAAGTATGGCTTTAAAGAGGTGTTCAAAAGTTGTTGTGGAGCTGGTGGCGGAAATT
TGAACTTCGAAGTGTTCAGTACTTGTGGTTCTCCTTCTGCAAGCTCTTGTCCGGATCCAT
CTCAGTATATTAACTGGGATGGTGTTCATCTTACTGAAGCCATGTATAAAACTATTGCTA
GCATGTTTCTAAATGGGACATATTGTAAACCTCCATTTAGTTACTTGCTAGCGAAAAAAC
AGTAGTTTTGAGCCGCGAGTCAGTACATGTCTCAAAATTGTTTGACTACAAATTTCAATT
TCTTTTTGTTCTTAAAATTTATGTCAAATCAAATGATACGTACTGTCCCGTCAAATTAGG
TTGGAGGAAGTATTGAAAAAGTGCTTTGAAGAGTCTGTTTGAAGGATTTTATACATAAAG
TCAGGTCTCATTCATGAGCTCTACACAATGGTAAAAGCATATACTAGCTATACATTTGAG
GAATAAACAAACTTTGATTTTT