Microarray Probes on PGSC0003DMT400038573
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5261_PI426222305 |
JHI_St_60k_v1 |
CTTGTTCTGATCCTTTAGTTTTCTAGGTTTTGTTTCTTTTTTGGTGTCATTAGGAGGAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400038573
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400038573 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G66770.1 |
+1 |
0.0 |
625 |
357/617 (58%) |
GRAS family transcription factor | chr5:26660723-26662477 FORWARD LENGTH=584 |
Transcript Sequence (2381 bp)
>PGSC0003DMT400038573 2381 pgsc_dm_v3.4
AAAACTTTGTCCTCGTTGTAAGGCTGAGCTTTTCTAAATTAAAGCTAAGCACTTCTCACA
CCACACTATAACCCCCTTTTCAACTCTCTGTCCCTCTTCCTGGGGCTACTCTGTTAGTCC
ACTCAAAACTTGCTCACCAGTTTCTTCCGATAACTGTTGTTATTGAGGTAATGTGTGAGT
AGTGTAGCTTAGCAAGATTTGGTGTGGAGAATGGCCTATATGTGTACGGACAGTGGAAAT
CTAATGGCAATCGCTCAACAAGTTATAAAGCAAAAGCAGCAGCAGGAGCAGCTCCAACAG
CAAGAACAACAGCAGCAGCAGCAGCAACAACAATTCTTGGGTGTTAATCCTTTGTGTCTC
AGCCCATGGACTTCCACCACTCATCAAACCTTAACTAATAGTCCCACTTTAGGATATGGA
CTTACCGGGGCGGGTTTTGCAGACCCATTTCAGGTCGCCGGAGGGACTGATGGCGGCGAG
CCGGGATTTCAGTTCCCTAACTTGGAACATCATTCGACCGGGTTTAGGTTTGCTGATTTC
GGCGGTGGACCGGGTGGTGAGTTTGACTCAGATGAGTGGATGGAGAGCTTGATAGGCGGC
GGAGATTCTACCGGAAGCTCTAATCTTCAATCTGGTTGCGAAGCCTGGCAGACGAGTTCC
GAATTCACTACCCTATACGGAGATCCGTTCTCGAGTTGTCCGAATCGTCTCAGTATCGGT
TCTTCTCCTCCGCCTCCGCCTTCTTCCGATCTGAATGGGGTCATTTTTTCGGAAACCCAG
AAAAATCTAAACTCACTACAACCACAGACATCTCCGTGGGTCGCACCATCTTCATCTCCT
CCTCCAATTGTTCAACCCGTGTGTAAAGAATCCAAGGTGGTATCAGTTGATGTGCTGCCC
TGTAGTTCCCCTGAAAGTTTTTCTTCAAAACCATTGTTGAAATCCTTGGTGGAATGTGCA
AGACTCGCTGAATCAGAGCCTGAAAATGTAGTAAAATCTTTGATTCGACTTAGGGAATCA
GTTTCCCAACAAGGAGATCCAATGGAGCGAGTTGGGTTCTATTTCTTAGAAGCTCTTTAC
AATGGGCTGTCGTCGTGTCAAGCAGAAAGAACTCCATCAATCTTTGGTACTACGCCGGAG
GAGCTCACTTTGTCATACAAAGCCTTTAATGATGCATGTCCCTACTCAAAGTTTGCTCAC
TTAACGGCTAATCAGGCGATTCTTGAAGCAACTGAAAAAGCAACGAGGATTCACATTGTA
GATTTTGGAATTGTTCATGGTATCCAATGGGCTGCTTTTTTACAAGCTTTAGCAACTAGA
TCAGCTGGGAAACCAGTCAGTGTTAGAATCTCTGGTATTCCATCAGTGGTATTGGGTAAC
TCTCCGGCAGCTTCACTTTTAGCTACAGGGAATCGTCTTCGTGACTTTGCGAAGCTTCTG
GATCTTAACTTCGAATTCGAACCGATATTGACTCCAGTTCAGGAACTAAACGGGTCTAGT
TTTCGAATTGATCCAGATGAAATCTTAGCTGTGAACTTCATGTTGCAGCTGTACAATTTA
CTGGACGAAACAAATGTTGGTGTAGAAACTGCACTCAGTCTAGCCAAATCATTGAATCCA
AGCATTGTGACATTGGGTGAGTATGAGGTGAATTTGAACGATGTAGGATTCCTGCAGCGG
TTTAAGAATGCACTGAAATATTACTCAACAGTTTTCGAGTCGTTGGATCCGAGCTTGACC
CGAGACTCCCCGGAGAGAGTACAAGTGGAAAGACTGATACTTGGCAGGAGAATTGCCGGA
GCGGTGGGCCTAGACGACGGCGGAACCAGAAGAGAATGTATGGAAGATAAAGAACATTGG
AGAGAATTAATGGAAGGGGCTGGTTTTAAACCAGTAACACTTAGCCATTATGCAATGAGT
CAAGCAAAAATTCTTCTTTGGAACTATAATTATAGTTCATCATTTGGATTAATTGATTCT
GCACCTGGGTTTCTCTCCTTGGCTTGGAAAGATAATCCCCTTTTGACTGTTTCTTCATGG
CACTAAATCAGTTATGTGTCCTGGTTCTGTTAGGTACTTTCTTCTAGAAGTGCTTAATTT
CAATTTCATTGCTCTCTGTAGATTAAAAAGTTAGTATAGAAAGATGATATTTTTGAGCAA
GTTAACTTTGAATTTCAAGATTAAGCCTTCTCTGTTTATATGAATAGTGTACTCTCTTTT
AGTGTCTTCTCTCTTGTTCTGATCCTTTAGTTTTCTAGGTTTTGTTTCTTTTTTGGTGTC
ATTAGGAGGAGAAATCAACTGTAATTGTGCATATATTTTGTAAATTATTAATAGCATTTT
GTTGCTTGCACGATTAGTGAAAGCTTGATGGAGTAAACGAT
