Microarray Probes on PGSC0003DMT400038501
Probe ID | Chip | Probe Sequence |
---|
CUST_9776_PI426222305 |
JHI_St_60k_v1 |
GACCATGCCAATGCCCTGCTAAATCAAGGCTATGTTTAATTTCTTTTAGGATTTGAATTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400038501
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400038501 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G20340.1 |
+1 |
0.0 |
577 |
269/490 (55%) |
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr2:8779804-8782490 FORWARD LENGTH=490 |
Transcript Sequence (1829 bp)
>PGSC0003DMT400038501 1829 pgsc_dm_v3.4
CAATAGTTTAGTTCATTTTTAACCTTATAAAAGCTAACCATTTATTTTTCTTTCAAGACA
ACATACACACAAATTGAAATAATGGGTACCCTCAACATCAACCATGAACTTGATGACCAA
ATTTTCAATACCATAAACCCTTTAGACCCTGAAGAATTTAGAAGGCAAGGTCACAAAATT
GTGAATTTCTTAGCTGATTACTATCAAAACATTGAACAATATCCTGTTTGTAGTCAAGTA
AATCCAGGGTATCTCCAAAAAATTGTACCAAATTCCGCACCTAATAACTCTGAGTCACTC
GAAAAAATTCTTAAGGATGTTGAAAGGGATATTATTCCAGGGCTAACACATTGGCAAAGT
CCTAATTTTTTCGCGTATTTTCCATCTTCAGGAAGTACTGCTGGATTCCTAGGTGAAATG
TTAAGTGTTGGATTTAATGTTGTAGGGTTTAATTGGATATCATCCCCTGCTGCTACTGAA
CTTGAGAGTATTGTGATGGATTGGTTTGGGAAAATGTTAAATCTTCCCAATTGTTTTTTG
TTTGCGAGTGGTGGTGGAGGTGTACTACAAGGTACAACTTGTGAAGCCATGTTGTGCACT
ATAGTCGCGGCTAGAGATCAAATGTTGCGAAAAATAAGTAGAGAGAATTTTGGCAAATTG
GTGGTATATGCATCTGATCAAACACATTTTTCACTTAAGAAGGCTGCCCACATTGCTGGG
ATAGACCCTGGAAATTTCCGAGTTATCCCAACAATAAAGGCTAATGAGTACACCTTGTGT
CCAAAATCGCTACGTTTAGCAATTTTGAATGACCTTAAAGAAGGAAATGTTCCTTTATTC
TTGTGCGCGACAATTGGGACAACTGCAACAACTTCTGTTGATCCATTGCGTTTACTCTGT
GAAATTGCTAAGGAATTTGGGATTTGGGTACATGTAGATGCAGCTTATGCAGGAAGTGCT
TGTATTTGCCCTGAATTTCAGGTCTTTCTTGATGGTGTTGAAAATGCAAATTCTTTTAGT
CTCAACGCGCACAAATGGTTCTTTTCCACTTTGGATTGTTGTTGCCTTTGGGTTAAGGAT
CCAAGTGCACTTACAAACGCGTTATCAACTAATCCTGAATGTTTGAGAAACAAGGCTACA
GAGTTAAATCAAGTGATTGATTATAAGGATTGGCAAATTGCATTGAGTAAGAGGTTTAGA
GCATTGAAGTTATGGTTAGTTTTGAGAAGTTATGGGGTAACTAATCTTAGAAACTTGATA
AGAAGTCATGTGAACATGGCTAAACATTTTGAAGGACTTGTAGCTACGGACAAAAGGTTT
GAAATCTTTGTCCCTAGAAAGTTTGCTATGGTTTGTTTTAGGATCTCCCCATTAGTACTA
AGTCAAGTTTCAACCAAATTTGATGATGAGAAAGAAGTGAACATGTTTAACACTAAGTTG
GTGGAGTCTATTAATTCATGTGGCAAACTCTATTTGACTCATGGAGTTGTTGGAGGCACT
TATATTATTAGATTTGCAATTGGTGCTTCTCTTACACATTATAGGCATGTTGACGTAGCT
TGGAAAGTTATACAAGACCATGCCAATGCCCTGCTAAATCAAGGCTATGTTTAATTTCTT
TTAGGATTTGAATTATATATGTACTGAAAGATTTTTATACTGTCAACGTTTAGTTATTTA
TTCAAAAACTAGGGGAATCTTAGTAGGTCAGTTAGTTGACTATCTGAATTATTATCTTGT
TCATGAAAGTTCAATTTCTCACCTTGTAATCCTCATTTCCAATTTTCCTTGCCCTATCCA
ATTTAAAAGGAAAAATTTGTATTCAAAAC