Microarray Probes on PGSC0003DMT400038215
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42198_PI426222305 |
JHI_St_60k_v1 |
GAGAGATATGGTTTAGGATATTTCTATCTTCAAAAGTTACTGTGCGTGCTTACATTTCTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400038215
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400038215 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G34930.1 |
+1 |
2e-95 |
325 |
293/932 (31%) |
disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905 |
Transcript Sequence (3056 bp)
>PGSC0003DMT400038215 3056 pgsc_dm_v3.4
GCTATAAATACATATTACTTGGCCTAGCGAAAAATATAAGCAAACACATACTTTACCCAA
ATACTTTTCACTTGCAAGTCTAAAACATTACACACCATGAAAGTGTTAGCAATAACACTA
TGGGTTCTCTTGTTTTTTATTTTGACAAATACCAAGTTTGTTGTTTGTGTAGGGATTTGC
AGAGAAAATGAGCAACAAGCGTTGGAGACCTTGAAGAAAGAAGTAGACGATCCCTCAAAT
ATTCTCTCTTCTTGGGTTGTCGGAAAAGATTGTTGTGAATGGGAAGGGGTCGTGTGCAAC
AATCTCACTCGTCATGTGATTGTGCTAAGCATTTATTTTGATTGGTTTGAGTCGAGATAT
CTAAGGATCAATAACCTAGAGTGGTTGACAAGTCTTTCGAGTCTTGAGAACTTGGAGATG
GAAAGTGTTGATCTTAGCAAAGCTAATAATTGGCCACAGGTTATTAACATGCTTCCTTCT
CTTGTTGATCTTCGTTTATTCAATTGTAGTCTTCATCATATAGCACCTCTACTTGATCAT
CACAATATTTCCTCACTCAAGTCTCTCGATCTTTCTGAGAATCGCAACTTAAATTCTTTT
GTTCCCAAATGGGTTTTCTACCTCCCCAATCTTGTTTCTCTTGACCTGAGTGATTGTAAT
TTTATTGGCCCGTTACCTGACGGTCCAGTTAACTTGACTTCTCTCACAACCTTCAAGGCT
TCTGGAAACTCTTTCAATTGTCGTTTACCCAAATGGTTGTTTGATTTGAATAATCTTGAA
CATCTTGACCTTTCTACTAGTGGCATTGAAGGTGTGATACAGAGTAAGAGCGGAAACATA
ACAAAACTTAAACATCTTGATCTTTCTAGCAATAACCTCAACTACACTATACCAAATTGG
CTCTATCAATGCAAAGATCTAGAATCACTTCAACTTGGATTAAATCGTCTTGAAGGAACA
GTTTCAAGTCTGATTTCAAATTTGAGCTCAATAACTATTATTGACCTTTCTAATAATATG
CTTTCTGGAAAGTTACCAAATGTAATTGGAAAGTTAGGGAAATTAGGATACCTTGAACTC
TCAGGAAATCTGTTTGAGGGAGATATATATGAATTATTCAATGTTAGGAGTAATTTCCTT
TCAGTGCCATTGCGAAATACTTCTTCTTTATCTACTTTGAGACTAGGTTGGAATAAACTC
ACAGGAGCTCTTCCGGAAAGTGTTGGCCAACTTTCAATGCTAGAAGACTTTTCCATCTAT
AACAATAGGTTGGAAGGCGTTGTAACGGAAAGTCATTTCTCTAAATTAACACATTTACAA
TACTTTTATGCATCTAGAAATAATCTGACTTTAAAAGTGAGTCGGAATTGGATTCCGTCT
TTTCAAGCCACAACAATGTTAATAGGCGGCTGGAATATAGGCCCTTCGTTTCCCATGTGG
CTCCGAACTCAGAACCAGATAATGTATGTCGACATATCAGATTGTGGAATACAAGGTGAG
GTTCCAACTTGGTTCTGGAACTTGTCTTCTCAAATTCGATTACTCAATCTTTCTCATAAC
CACTTTGTTGGTGAGGTTCCAATCATCTCAACAGATGAGCAGAGTGGTTCTCCGCTAATG
TACTTGGCTTCCAACAATTTTAGTGGACCATTACCATTGATTTCAACCAATGTAAGAGAG
CTAGATCTCTCAAGCAATTCTTTTTCCAAAGGTTTATCTAACTTTTTGTGTGAAGCAAAG
AATGGATCATACAAATTGAGAATCTTAAACCTCGGGGGAAATGATTTATCAGAAGAAATT
CCTGATTGTTGGATGAATTGGCCGGAGTTGAAAGTTTTAATCTTGAGGGACAATAATTTG
ATTGGAAGCTTACCAAGATCTATGGAGGTTTTGAGTAATTTGCGATCATTAGACTTACGA
AGAAATAGACTTAACGGTCCGTTTCCTTCATCCTTGGAAAACTGCACAAAACTGCATAAA
ATAGATTTAGCTGAGAATGAGTTTATTGGAAAATTACCATCTTGGTTGGGAATGAGGTTT
CCAACTTTGATAGTCCTTATCCTTCGGTCCAATAAATTCGATGGTGAATTGCCTCAAGAA
CTTTGTCACCTCAAAGATCTTCAAATCTTAGACCTTGCAAACAATACATTTGTTGGAATC
ATACCGAGGTGTATTGGCAATTTGAGTTCGATGGTTAAAAAAAAAAAGGAATTGGAAGAT
GATGAAGACTTAAATTACTCTTATTATATAGGAGTTCTGATAGAGAGTGCAATAGTGACG
ACTAAAGGCAACATGTACCAGTATGACACCATTTTGGCGTTGTTTACAAGTATGGATATG
TCTAGCAATAATCTTTCTGGAGATATTCCTATAAGTGTAACACGTCTTGCAGGATTAAGA
TCATTTAATCTTTCCAAAAATAATCTGACTGGTAGGATTCCAAATGACATTGGTGTCATG
AAAGTCTTGGAATCTGTTGATCTTTCAGAAAATCAACTTTATGGTCAAATCCCGCAAAGT
TTTTCGAGTTTGACCACTTTGAGCTACTTGAATCTATCTGATAACAATTTGTCAGGTATG
ATACCATTGAGCACTCAACTTCAAAGCTTTGATCCCATGAATTTTCAAGGAAACAAACTC
TGCGGACTTCCACTCTTGGTGAACTGCAGTTCGAATGGTAATATTCCAAATCACAAGTAT
GAAGATGGTGAGAGTGACAAAGATGAAGTGGATTGGTTTTACATTTCAATGGCTATAGGA
TTTGCACTAAGCTTTTGGGGTGTTTGTGGTTCATTGTTTTTCAAGAGATCATGGAGACAT
GCTTATTTTCGTTTTCTAGACCGTAGCTGGGAAATGTTACTTGCAAAGTTACCAATATGT
TGAGAGATATGGTTTAGGATATTTCTATCTTCAAAAGTTACTGTGCGTGCTTACATTTCT
CATGTTAGAAATCATTTTGTATTCAATATGTAGACTTTTATGTCTTAACAACTTCCTCAA
ATGAATGTTTCTTAAGATGTTCAAACAATGGTGTTTCTTTCATAGTTCCAATTTTC
