Microarray Probes on PGSC0003DMT400037826
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38881_PI426222305 |
JHI_St_60k_v1 |
TCAGTTTTCGTGGGAGATAATAATCAGGATCACGATGTACGAGTTTGTAAAAATTCCTCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400037826
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400037826 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G23240.1 |
+2 |
3e-24 |
99 |
70/120 (58%) |
ethylene response factor 1 | chr3:8295705-8296361 FORWARD LENGTH=218 |
Transcript Sequence (944 bp)
>PGSC0003DMT400037826 944 pgsc_dm_v3.4
CAACAACTTTGAGAGTCTCTTGACAACCCAAAAAAACACCAAAAATCAAAAGATGTCAAG
CAACTCAAGCCCACTAGAGATAGACACTTCATTTTCACATTCCAATTTGTTGTTTTTCCA
AGATCAATCACCATGGAGTAGTAATGATCTTTTCTTCAATGATCCATTTGTTGATATTGA
TGAATATCCACCAATAATTATACCATGTAATCATCAAGATATAGTTGTAGAATCCTCAAA
CACTACTACAACAACATCAAAAGCAAGTAGCCAAAATAGTCATCATGATCAAGAAGAGGT
AACATCACAAGAGAAAAAACAAGAAGATGATCAACAAAAACATTATATTGGAGTTAGAAA
AAGGCCATGGGGTAAATATGCATCAGAAATTAGGGATTCAACGCGTAATGGAGTTAGGGT
TTGGCTAGGAACATTTGATACTGCTGAAGAAGCTGCTTTAGCTTATGATCAAGCCGCATT
ATCAATGAGGGGTCCTTGGTCTCTTCTCAATTTTCCAATTGAAGATGTCAAAAAATCACT
TGAAAAAATTGAGTATTCTTGTAAAGATGGATTATCTCCAGCTGCTGTTTTAAAAGCTAC
TCATAAAACTAGAAGAGTCAAACACAAGAGAAGTAGTAAAAAGAAGAACAATCAAAATTT
AGAAAATGTTTTTGTTTTTGAAGACTTGGGAGTGGAATTATTAGAAGAGCTTTTAATGAC
TTCATCATAGAAATTACTATAGTCTTCGTGTCCAAAATACTGAGTTCAGTTTTCGTGGGA
GATAATAATCAGGATCACGATGTACGAGTTTGTAAAAATTCCTCTCTCTTTTTTTTTTTT
TAAAAAAAAAATTCTGGATTTCTTGAAGAATTTAGAGTTTAGTTTCAAGAAGAGCTTTTG
ATGAGTTGAAATAATGTTTCAGACTTGTTTGGTACATATAAATT
