Microarray Probes on PGSC0003DMT400037207
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26407_PI426222305 |
JHI_St_60k_v1 |
TTCATATCACTCATGCACGGCTTCACGAACTTGTTGAACGTGCCGCTTCTCAACTTGTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400037207
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400037207 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G48990.1 |
+3 |
0.0 |
795 |
403/511 (79%) |
AMP-dependent synthetase and ligase family protein | chr3:18159031-18161294 REVERSE LENGTH=514 |
Transcript Sequence (3061 bp)
>PGSC0003DMT400037207 3061 pgsc_dm_v3.4
CCTTTGTACTACTATTTGAATAGAGAAAAAACAAAGAAGCTTCACGCCTCCCTTCTATAT
AATAACTTACCAACCGTTTACATTCTTCATCACCATTTCAATCTCCTTTTTCACTATTCA
TTTATTTTCATTTACAATTCGCTTGTTGCCGAATATTCGTTGTTTTCGTGGTTATTGATT
TTGCTATGGAGAGTATGACGCTCACTGGATTATTGAAACATGTTGCTGAAAAATTTCCTT
CTCACTGTGCGATTTCCATTTCCGGCAAGTTTCATATCACTCATGCACGGCTTCACGAAC
TTGTTGAACGTGCCGCTTCTCAACTTGTATCTGCCGGTGTTAAGCATGGCGATGTCATCG
CTCTCACCTTCCCCAACACAATCGAGTTCGTGATCATGTTTCTAGCTGTAATTCGAGTTA
GAGCCACGGCGGCGCCACTGAATTCAGCGTATATGGCAGAAGAATTTGAGTTTTATTTAT
CTGATTCAGAATCGAAACTCTTAATAACTGCAAAAGAAGGAAATGAAGCGGCTCAAGCCG
CCGCCTCCAAGCTCAAAATCCCTCATATTACTGTAACCCTGCCGGAAGCCGATTCTGATA
TTGCTTTCTCCCCGGCTCCTCCCCAATCGAACCTTCAATCGGCGTCAGAAATCGTAAACG
ACCCATCGGATATTGGACTTTTCCTTCATACATCAGGCACCACGAGCCGGCCAAAAGGTG
TTCCTCTGTCTCAGCTTAATTTGGTATCTTCAGTGAACAACATCAAATCTGTGTACAAAC
TCTGTCACTCCGATTCGACCGTGATCGTGTTGCCGTTGTTTCATGTTCACGGGTTAATGG
CCGGGTTACTGAGTTCACTCGGAGCCGGAGCATCCGTGACACTTCCATCTGCTGGTAGAT
TTTCCGGTACAACTTTTTGGTCAGACATGAAAAAATACAACGCAACATGGTACACAGCTG
TGCCTACAATTCACCAAATTCTGTTGGATCGTCACCTCAGCAAACCCGAATCTGAATACC
CGAAGCTCCGATTCATTCGGAGCTGCAGTGCAGCACTGGCTCCATCAGTGATGGCCCGGT
TAGAAGAAGCATTTGGGGCTCCTGTTTTGGAGGCATATGCAATGACAGAGGCAACCCATT
TGATGGCTTCGAACCCGTTACCCGAGGATGGACCACATATTCCCGGGTCGGTTGGGAAAC
CTGTGGGTCAAGAGATGGCGATATTGAATGAGAATGGTGTTGTACAAGGGCCTAATGCTA
AGGGGGAAGTTTGTATTCGGGGTCCAAATGTGACGAAAGGGTACAAGAACAATCCAGAGG
CTAATAAATCAGCTTTCCAGTTTGGTTGGTTTCATACCGGAGATGTGGGTTATTTGGACT
CTGATGGATACTTGCATTTGGTTGGCAGAATCAAGGAGTTGATCAACCGTGGAGGAGAGA
AAATATCACCTATTGAAGTGGATGCAGTCCTAGTTTCTCATCCGGAAATTGCTCAGGCTG
TTGCTTTTGGAGTTCCTGACGACAAGTATGGTGAAGAGATAAATTGTGCAGTTATTCCAA
GAGAAGGGTCAAACATTGATGAAGCAGAGGTTATGAGATTTTGCAAGAAGAATCTGGCAG
CCTTTAAGGTCCCAAAGAAGGTTTTCATGACTGATTCTCTTCCACAGACTGCATCAGGGA
AAATTCAACGACGACTTGTTGCAGAGCACTTCCTTGCACAGATTTCAACTGCTAAAGTCC
CCAAGTTTGGAGCGTAGACAAATTGTTGGCTATCTACGGTTCGTTCTCCTATTAACAATA
AAATGAATGTGTTTTTCAATGTTACTTACATACATACTACTTGGTCAAGAAATTGGGACA
CGAGAATATATCAGTGCCTCTAGATTTTCAGTAATGGCGCAAGTGTATTCTCTTCTGATC
TTACCAGGATATTGTTTGGCTAGATATCTTGTATTTCTCCTCTTAGTAATGCAAAGGTTC
TTTTATTTGTAACGTTGCCTTTATCTTTATCATAGCAAAACATAATGCAGTCTCCAGACT
TTGTCCAAGTAACATTTCATATTCACGAACACATTGAGATAATCGTTTTTGAAGCGAGCC
ACAATTCCCTTAGTCGCAAAATATTGGTACTAATAAGAATACAATGAGCTAGATTACAGT
GATAGGTATGTGAAGCAACACCAACTATAACTACATGGGATTGAGCAACTGTCCCACCAC
GATGTCACATGCAAAACAAAAATCCAAACCCTAAAACATTTAAAAGAATGAACAGTGGGA
CGACTGGCATAAACACCACTCGAAAATTCTCACCAGCTGAATTAGTTAAGCTTCTTGACC
TTCTTCATCCTCGTCTTCGTAGTCATAATCTTCCTCCTCAGCTGATGCATCTTGATATTG
TTGGTACTCAGAAACTAGATCGTTCATGTTGCTTTCAGCCTCTGTAAACTCCATCTCATC
CATACCTTCTCCAGTGTACCAGTGCAAGAAAGCCTTTCTTCGAAACATTGCTGTAAACTG
CTCACTGACCCTACGGAACATCTCCTGAATTGAGGTGGAATTGCCAATAAAAGTTGAGGC
CATCTTCAGTCCAGTTGGAGGGATGTCACAGACGGTAGACTTCACATTGTTAGGAATCCA
CTCCACAAAATAGGAAGAGTTCTTGTTCTGCACATTTATCATTTGCTCATCAACTTCCTT
GGTGCTCATTTTTCCCCGGAACATCGCTGAAGCAGTCAGATAACGACCATGACGAGGATC
AGCAGCACACATCATGTTCTTTGAATCCCACATCTGTTGAGTGAGCTCAGGAACAGTCAG
GGCTCTGTATTGCTGTGACCCACGAGAAGTGAGAGGAGCAAATCCAACCATGAAGAAATG
CAACCGAGGAAATGGGATGAGGTTGACAGCAAGCTTGCGGAGATCAGAATTGAGCTGACC
AGGGAACCGGAGACAGCAAGTCACACCACTCATGGTGGCAGAAATCAAATGATTAAGATC
TCCAACTGAGGCAAACATCACGAGTTAGTACATTAATCTACATATACTAGCATAATACAA
T
