Microarray Probes on PGSC0003DMT400037169
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26455_PI426222305 |
JHI_St_60k_v1 |
GTGTTGCAATCAAATTTCATCAGAATTTTAACAGAGCCATATGTATTTGTGGACACTCCG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400037169
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400037169 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G48880.1 |
+3 |
5e-118 |
350 |
167/298 (56%) |
RNI-like superfamily protein | chr3:18127873-18129008 FORWARD LENGTH=309 |
Transcript Sequence (1286 bp)
>PGSC0003DMT400037169 1286 pgsc_dm_v3.4
GTTCCAGGTTATAGTTTCCTAGTTTCTTCACCTTCCTCAGACGTATTTGTACACTCTTCT
ATGTTTCTTCGTATTGCAGGGCTTAACTTTTTATTCTTCATGGTCTGAGTATATTCACTA
GAACACAAAATGACAATCAGAAACATCAATTTGACGTCAGAAATTCAAATATTCTTCATG
GATCTAGTGAAGTAATAACCTTTCTTGTTTCTACAGGAGTTTAGGAGATTGAAGCTGTTG
TTATGGAAAAAGGAGATTCTCCTGTAAGGAGATGGGAGGACCTTGATAATGATATCTTGG
TGAAGATACTCCAGTCCTTTGACCTTTTCCAGTTGATATATGCAGTTCCTCAAGTTTGTC
GTGCATGGCAATTGGCTTGTTCTGATCCACTTCTCTGGAAAACGCTGGACTTGTCGGTGT
TGCAATCAAATTTCATCAGAATTTTAACAGAGCCATATGTATTTGTGGACACTCCGTCTC
GTGAAAAATTGACCCGCCTCCTAAAGATTTGCATGAACCTCAGTCATGGAAACATAGAAA
CATTGATCTTCCATTACAATTTGTATGTTGACGACAATCAGTTGACTTATACTGCCAATA
GGTGTCCACGGCTTAAACGCCTTGTTATGCCTGCTTGGGAAAAACTAGAAAAGCCAGCAA
TACGCCGTGCTTTTCGTAAATGGAAAGATCTTGAATCACTGACCATGCCTAGTTTAGAAA
AACCTGCCTATGTCATCAAGAAAATTGCAAGGAGTTGCAAAAAAATTGCTGAGCTCAAAA
TTATGGGGCCTTGTGATATTCTGTTTGCGTCTACACTAGTATCATTTCTTCCAAACTTGA
AAGTGTTGAGTGTGAGGTGCACGGAGTTATCTAAATCTGCTTTGGTTATTCTCTTGGAGG
GGTTAAAACAGTTGAAAGTGCTCAACATATCGCATTGCATAATTACTGAAGATCTTCCTC
CACCCGCACCTACGAAAATTCTGACTGAGCTTGATGAATCCATTCTCGAAAAAGCATCTA
GGTTAGACAAGTTCCTAACCTGCATGAGTGACTCATGCATCATGTGTCAGCGCACTCGAA
ATGATGAAGGGTTCATGAGGTGGTACAAGTATGAAGACCTCTGGAAAGTGGATGAGGTGA
AATCTCTTGCAATTTGAAAACTTTAAGAATGTTTTGCTTCATGAGTTGAAGGTGCAGTGT
AATGTGTAAACTTGTGTGTATGAAACACATACAATAAAAACTTGTAACGCTACTTCTGTG
TTTTAAGTCTATTCTCTTTGACAGGG
