Microarray Probes on PGSC0003DMT400036487
Probe ID | Chip | Probe Sequence |
---|
CUST_40275_PI426222305 |
JHI_St_60k_v1 |
CCTACCCGTAACAGCTTCAAGTGCCACTAATTTGTATCGTATTTGAGTTTTATATATACT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400036487
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400036487 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G05340.1 |
+2 |
2e-160 |
458 |
226/298 (76%) |
Peroxidase superfamily protein | chr5:1579142-1580819 REVERSE LENGTH=324 |
Transcript Sequence (1187 bp)
>PGSC0003DMT400036487 1187 pgsc_dm_v3.4
CTTGTTTCTAATTTCAAAGTAATAGGTTCTAAGTAAGAAAAATTCTTCCAATATGGCTTG
TTTTAAGAGTGCCATAGTTTTGTTTTTTCTAGTGAGTTTAGTGGGAAGTTCCTCAGCTCA
ACTCACCACTGGATTTTACTCAAAATCATGTCCTAAGCTCTATGAAACTGTGAAATCTGT
GGTGAACTCTGCTATTCAGAAGGAAACCCGAATGGGTGCTTCCCTCCTTCGCCTATTCTT
CCACGATTGCTTCGTTAATGGATGCGATGGATCATTGTTCCTGGATGATACATCAACCTT
CACAGGGGAAAAGAGGGCACAGCCAAATTTCAATTCGGCCAGAGGATTTGAAGTTATTGA
CAACATCAAATCTGCTGTCGAAAAAGTGTGCCCTGGTGTCGTCTCTTGTGCTGATATTTT
GGCCGTTACCGCCCGAGACTCTGTTGTAATTCTTGGAGGACCTAATTGGGATGTAAAACT
GGGAAGAAGAGATGCCAGGACGGCAAGCCAAGGTGCTGCCAATAACAGCATTCCTACCCC
AACTTCTAACCTTAACCGTCTCATCTCTAGCTTCAGTGCTGTTGGCCTTTCTACAAAGGA
TATGGTTGCCTTATCTGGAGCTCATACTATCGGACAAGCAAGGTGCACAAGTTTCAGGGG
ACGCATATACAACGAGACCAAAAACATGGACGCATCACTAGCGCGAACCAGGCAAAATAA
TTGCCCGAGAGCCTCAGGATCAGGGGACAACAATTTGGCACCTCTTGATTTACAGACTCC
TACGCGCTTCGACAATCACTATTTCATAAACCTTGTTAACAAAAAGGGACTGCTCCATTC
TGATCAGCAGCTTTTCAATGGAGGATCCGTCGATTCAATTGTCAAATCATACAGTAACAA
TCCCAGCAGTTTCACCTCTGATTTTGTGACCGCAATGATTAAGATGGGTGATAACCGTCC
CCTCACTGGATCTAAGGGAGAGATCAGGAAGAACTGCAGGAGAATCAACTAATTATGTTA
ATTTCAAGTGTGTTTGGAGATTGCTATTTTGAATTTTGAATTTTGAATTTGTACTTGTTT
TGTTGCTTGATTTGTAGGCTCAATGGCTGTTACCTACCCGTAACAGCTTCAAGTGCCACT
AATTTGTATCGTATTTGAGTTTTATATATACTATAAAAATATCTTTC