Microarray Probes on PGSC0003DMT400036486
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_40276_PI426222305 |
JHI_St_60k_v1 |
GTTGGAAGGCAAAGCCATAGACCTTCTTCCTTAGATTTGGAAGATTATTTAAGGATTAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400036486
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400036486 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G40460.1 |
+3 |
6e-143 |
421 |
211/295 (72%) |
Major facilitator superfamily protein | chr2:16897123-16901171 FORWARD LENGTH=583 |
Transcript Sequence (1094 bp)
>PGSC0003DMT400036486 1094 pgsc_dm_v3.4
AACATGTTGAAGTCTGGACCATCTTATTTAAAAGTTTAAGATGTTAGAGAGAACGTATAC
TCAACACTATCAACTAAGCCTCTGTTTTATTCAGGTTCTTGGACAAAGCGGCAATGAAAC
AAGACAATGATACAGGGTCAAGGCTACCATGTACAGTGACTCAAGTGGAAGGAGCGAAAT
TGATCACAGGAATGGCCATGATATGGCTAGTAACCTTAATTCCTAGCACCATTTGGGCAC
AAATAAACACTCTGTTTGTCAAACAAGGCACCACTTTGGACAGACACTTGGGTTCAACAT
TTCAGATTCCAGCAGCATCATTAGGAAGCTTTGTGACTCTAACTATGCTATTATCTGTGC
CAATGTACGATCGATATTTCGTGCCATTTATGCGCAAGAAAACAGGAAATCCAAGAGGAA
TCACATTACTCCAGAGGCTAGGAACAGGGTTCTTCATTCAAATTCTAGCCATCACGTTTG
CTTACGCGATGGAAGTAAGAAGAATGCACGTCATTAAAATGCATCACATCAACGGGCCTA
AAGAAATAGTCCCTATGACAATATTTTCTTTGTTGCCTCAGTATGTGCTATTGGGTGTTG
CTGATGTGTTTAATGCCATAGGGTTGTTGGAATTTTTCTATGATCAGTCACCAGAAGATA
TGCAAAGCCTCGGAACGACGTTTTTCACAAGTGGAATTGGGCTTGGAAATTTCTTGAATA
GCTTTTTGGTGACCATGGTTGATAAAATTACAGGGAGTAATGGAGGGAAGAGCTGGATTG
GAGACAATATGAATGATTCACACTTGGATTACTATTATGCTTTCCTCTTGGTCATGTCTG
CCTTAAATTTGGGAGTTTTTCTGTGGGCATCCAATAGATATATCTATAAAAGGGAATCCA
GGGAAATGAAGGATGAATTTCCAGAGTTGGAAGGCAAAGCCATAGACCTTCTTCCTTAGA
TTTGGAAGATTATTTAAGGATTAAATTTAGGATTAATCTCCATCTGTTTTTAACTCCCTG
TTGTATAAGTCAATTACATACCATAGCTAATTAATATAGTGATTTTTGCATGGTATGTCA
TGTTTAAATAGTTA
