Microarray Probes on PGSC0003DMT400036038
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15805_PI426222305 |
JHI_St_60k_v1 |
TAAAGCAATTTACAGATGGGGCCCAAGATTTATATATCAGAGTCTCTGCATCTGATTTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400036038
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400036038 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G11410.1 |
+1 |
0.0 |
822 |
418/803 (52%) |
S-locus lectin protein kinase family protein | chr1:3841286-3844284 FORWARD LENGTH=845 |
Transcript Sequence (3679 bp)
>PGSC0003DMT400036038 3679 pgsc_dm_v3.4
TTCATTTTGGTCCAGAGTTTAAAGTTTGAGGAACCTAAACAGAGAAGATTACCTTGTTAG
AAAGCATCAGTTATGTGTCAGAAGAAAGAGTTGTTGATAGTAATTGTTTCATTTCTTGTC
CCATTTTGTAGTTCCATAGATACCATTTCCTTTAACCAATCTCTCAAAGATGGTGATTTG
TTGATCTCTTCAGGGAAATCTTTTGCTTTGGGTTTCTTTGGGAATTCCCCTGATAAACGT
TACGTCGGAATTTGGTACAACAATGTTCCTGAACTAACTGTTGTTTGGGTTGCCAACAGA
GACAATCCTGTCAATGGCACATCTGGGATTCTCACCATCGATTCAACTGGAAATCTTGTT
GTACATCTCGATGCGGAAACAAAAACTGTAGCCTGGAGAACAAATGTTTCTTCAGCTACA
AAACGAGCAGACTCGTATACTGCTAAGCTGGAGGATTCAGGGAATTTTATATTGTTTCAA
GACTCCAAAATGGATGTTACTGAGTGGCAGAGCTTTGATTATCCTACCAATACTTTGCTT
CCTTCAATGAAATATGGAATAGACAAGAGGACGGGTTTGAACCGGTTTCTAACATCCTGG
AAATCGTTGAACGATCCAGGCACTGGAGAGTATCGTTACACAATGGAGCTCAATGGGACA
CCTCAAGTTTTCTTGTACAAGAACTCTAGCAGGATTTGGCGGACAGGATCCTGGACGGGT
CATGGTTGGAGTGGTGTACCAGAAATGAGCCCACGATTCATCTTCAGCCTTAGTTATGTG
GACAATGATACCGAGGTTTCCTTGACATATGGCATACATGACAGTTCAATAATCTCAAGA
ATGGTCCTGAATGAATCCGGGATCGTGAACCGGTTAACCTGGCAAGAGAGTGAGCAAAAG
TGGGTGCAATTTTGGTCTGCCCCTAAAGACCCTTGTGACAATTATGAACATTGTGGAGCA
TTTAGCAATTGCAATCTGTTCAATTTGGCTGAATTTGAATGCAGTTGTCTTCCAGGGTAC
GAGCCAAAGCTAAGCCGACAATGGTTCTTGAGAGATGGCTCTCATGGATGTTTGAGGAAG
AAAAATGAAGAGGTGTGCAACAATGGTGAGGGATTTGTCACATTAAGTCATGTAAAGGTC
CCCGACACAGGTGCAACTAGGATGAACAAGAGCATGGGATTGAAGGAATGTGAAGAGTTG
TGTCTGAAGAATTGCTCCTGCACAGCCTATGCAAGTGCTAATATTAGTGCTGGAGGAAGT
GGATGCATCACTTGGTATGGTGAGTTGATAGACATAAAGCAATTTACAGATGGGGCCCAA
GATTTATATATCAGAGTCTCTGCATCTGATTTAGCGCAATTCTCGAAGAATTCAAGAGGC
CATAATAGGAAAAGAATGATAGGGATTCTAGCAGGGTCTGCTGCAGCAATAATTCTTGCA
CTCTCTTTGGCATGTTGTTTGGTGATCAATATAAGGAGAAATGATAATGAGAGAAGTGAA
AGTATAGCATCCTATGACGGCATGGATGAAAGTAAACATACAGAAATCTCTATCTTTGAT
TTAACCACAATAACTAATGCCACTGATAAGTTCTCTGATGCTAACAAACTTGGTGAAGGA
GGATTTGGTAGCGTATACAAGGGTCACCTGACAGATGGACAAGTAATAGCTGTCAAAAGA
CTTTCAGTAACTTCAGGACAAGGGACCGAGGAGTTCAAGAATGAAGTCACACTAATTGCA
AGACTTCAGCACAGAAATTTGGTGAGGCTTTTAGGATGTTGCGTTCAACGAGGAGAGAAG
ATGTTGGTTTATGAATATATGCCAAACAAATCCTTGGACAGTTTTATTTTTGATAAAACA
AAAGGGTCTTTGTTGGATTGGGGAAAACGGTTTGAAATCATACATGGGATTGCACGAGGA
ATGTTATACCTTCACCAAGACTCTAGACTAAGAATTATTCATAGGGATCTAAAAGCAAGC
AATGTTTTACTCGATGCCTCCATGCAACCAAAAATATCAGACTTTGGAATGGCCAGAATA
TTTGGAGGTGACCAAATGGAAGCAAACACAAATCGAGTTGTTGGAACATATGGTTATATG
TCACCTGAATATGCAATGGTAGGGCACTTTTCAGCAAAGTCTGATGTTTTCAGTTTCGGG
GTTTTGTGTTTGGAAATTATCACTGGCAGAAAGAACAACAGTCATAAGGATCAGGAGAAA
TCTCGACATTTAGTTGGATATGTTTGGGATCTTTGGAAGGATGAAAAGGCTTTAGATGTT
GTTGATCCATTGTTAGGTGGCTCATATGAAGCTTGTGAAGTTTTGAGATGCATCCACATT
GGCCTTTTGTGTGTACAACCGTTTACAGATGACAGACCGACTATGTCAGAAGTGGTCTTC
ATGCTGTGCAATGAAACAAATCTTCCTTTCCCTAAACAACCTAGCCTTATATTCAGATCA
GAGAATCATAGTTCAGTTACACACTCTTCATCAGCAAGCATAGCAACATCATCTGTCAAC
GATATGTCTATTTCAACAGTTCATGGTCGCTAGAGCTTATGCTAACTATTCAAGAACTAT
TTTGAAAGAAATACAGAATTCCTTTTTCTGTACTTTGCTTTCATAGTATTAGAGAGATTT
ATTGGTGGGTTATACACAACATTTAACATGCTAGTCCATTCTTGATTCAAACTAGTGGGG
TTGGGCTTTAATAGCACTGGAACCAAAACTGACTTCTGATTCCCCATGGCCCATGTTACA
GACTTAAAGGTAGGTGGGTGGCAAAGGATTGGTAGGAAAGAAGCATAAACACAGAGGGTT
TCTATTTCATCTGTGAATTAAATGGTGCTCTTTGTCAGCTGTTTTTGATAATTGCCCCAC
TTCATGTTTTCTTTAACAGTCTTCTCTGTGTTCATCAATGCTCTAAAAGCAACAAAGGCT
AATCCTGCTAGCCACACACAACTTTTCAATTTTTTTATTGATTTGCAGGATAGTAATTTG
GTTGTGGAGTTTTGTCAATAAATGAGATATTTAACTATTATTAGTTGGTTATGTTTTTCC
TCAAAAAGTTATGGATAAGAAAATACAAACATGTAAGTTATCTTATGTAAGATTTTAACT
TTTGTTTCATAATTAGATCATGAGATAGACATGTATCAAATACAACAATAATATTATGAT
CATGAGTAAGAGCACTGTTGTCTCAATCTTTCTGTGATGAGTATCTGTAAAAGTAATATC
AACTAGTCTGTTGAAAATCTTTTAGCATTAAATGCATTGAATCATTGAAGACTTATATCA
TACTTTGGGAAGTAATGAGCACTAGATACATTTGATACTCAGATAACAGAAATACATATA
CACGTCAGACAACTAACGAACATAAGGTGCGGTAATTGTCACCTCGTTGATCGAAGATGA
TGCTGTTTCTGTAGTAATCAAGTCTGAGTTACGGGTAATGAAGGGCTTCTTCGGGGAGGG
AACCGTTGCTTCAATACTTAGCATGGACAGAATTGTTGACATGGTTGGTCTGTCTGCTGC
GTTGAGTTGCAAACACAATAGTCCTACTAGAATGCAGCGTAATGCTTCCTCACTGGGACA
AGAATCAACTATTGATGGATCTACCAGCTCAAAGGCCTTACCATCATTCCACAACTCCCA
GGCCTGAAGCAGCAGTTCA
