Microarray Probes on PGSC0003DMT400035599
Probe ID | Chip | Probe Sequence |
---|
CUST_39150_PI426222305 |
JHI_St_60k_v1 |
CCAGCATCTGTTCTTGCTCTAGATTTTGCATGAAATTTTAGTCACATAATAGTTGTACAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400035599
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400035599 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G65730.1 |
+1 |
1e-173 |
353 |
177/293 (60%) |
YELLOW STRIPE like 7 | chr1:24442639-24446122 FORWARD LENGTH=688 |
Transcript Sequence (1675 bp)
>PGSC0003DMT400035599 1675 pgsc_dm_v3.4
ATTTGGAATGTTGAAACAGCCTCTTACTAGACAGGAGAATACCGTCGTACAGACGCTTCT
TCTGGCATTGCTTTTAGCAGTGGGACAGCAAGTTATATGTTGGGAATGAGTCCATACATA
GCATCTCAGGAAATTTACCAATTAATACTAAGAATCTTGCTATTACTTGGATGCTTCCTT
ATCTTCTTGTTGTTAGCTTTGCCGGTTTATTCTCAATTGTCGCACTAAGAAAGATGATGT
TATTGAAGTACAAGTTGGCGTATCCAAGTGGAAGCGCAACTGCATACTTGATCAACTGTT
TCCACACTCCTAAAGGGGCAGAGCTTGCCAAGAAACAAGTTGGTTCCTTGTTCAAATCGT
TTGGGTTCAGTTTTATATTTGGGGCTGTTCAGCAGATATATGAAGGCTGTGGATTTGCTA
CATTTGGTTCCCAAGCCTATGCCAAAAGGTTATATTTTGATTTCTCATCGACCTATGTTG
GAGTTGGTATACTTTGCCCATACATGGTCAACATATCATTGCTAACGGGTGCTATAGTCT
CGTGGGCTTTCATGTGGCCAATGATTGAAGCGAAGAAAGGGGACTGGTACTCTGCCCATT
TATCCGCAACAAGTCTACATGGTATCCAAGGATACAGGGTATTTATCACAATTGCCATGA
TGCTTAGTGATGGTCTTTTCCACTTTGCCTACATGTTGGTGGACGGTGGTTACAATCTTA
AGTTTCACAGAGAGGACGACTAGTCCTTGTTCAGAAGAAGAAGATGATGATGAGAAGATT
CGGAACGACTACTTCTTGAAAGACCAGATTCCCAATTGGGTAGCCGCTGGTATTGCAGTC
GTATCTATCATTGTAGTACCTATGATCTTCCACTCACTCAAATGGTATCACGTTTTGGTT
GCCTATTTAATTGCTCCTATTTTGGCCTTCTGCAATTCTTATGGAGCCGGCCTCACTGAT
TGGTCCCTCGCCTCAAATTACGGAAAGATTGCAATCCTTACATTTAGTTATTGGGTTGGT
TTGGAGAATGGTGGAGTGATTGCTAGACTTGCTTCATGTGGTTTGATGATGAGTATACTA
GACACAACTTTTGGCTTGATGGGAGATTTCAAGACTGGTTACTTAACTCTTACATCCCCG
CGTTCCATGTTCTTTAGCCAACTCATTGGAACTGCCATGGGTTGTGTCATAACCCCTTTA
TTATTCTGGATTTTCAACAGTGCCTATCGATTAGGTGATCCAGAAGGTTCATACCCTGCA
CCATATGCTCTCATGTATCGTGGAATTGCCCTACTTGGCGTCGAAGGTTTTGGAAGTCTA
CCCAAACATTGCCTCAACCTCTCTATTTGCTTCTTTGTGGCTGCTATTCTCATCAACCTA
GTGACTCAACTGCTGAAGAAATTTGCGACTAAGTATAGAATTTATCGATTCATTCCGAGT
CCAATGTGCATGGCCATACCATTTTACCTTGGAGGCTACTTTGCCATTGACATGTGTGTA
GGGTCATTGATCCTATTCGGTTGGCAAATGTATAACAAGCAGAAGGCTAAAGATTTTGGA
CCTGCAGTGGCTTCTGGTCTAATATGTGGTGACTCATTGTGGGGAATTCCAGCATCTGTT
CTTGCTCTAGATTTTGCATGAAATTTTAGTCACATAATAGTTGTACAGATCAATT