Microarray Probes on PGSC0003DMT400035512
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44213_PI426222305 |
JHI_St_60k_v1 |
GCACTCACCATTTGGTCCACTGTATTTATGTGGCTCTTATCATGATAAATTACAAATCTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400035512
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400035512 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G17500.1 |
+3 |
1e-93 |
186 |
92/172 (53%) |
Auxin efflux carrier family protein | chr2:7607063-7608990 FORWARD LENGTH=396 |
Transcript Sequence (1227 bp)
>PGSC0003DMT400035512 1227 pgsc_dm_v3.4
ACAGTAACTCAAAATTCTGGATCTGCCTCTGCTCCGAACGCCTCCACATTGTAAAAGTTG
CTCTAACATAATTTTGACAAACAGGAAACTTGGGAAATCTTCTTTTGATTGTCATTCCTG
CAATTTGCAAAGAAGATGGAAGTCCATTTGGTGATCATAAAACTTGTGCTTCTGTTGGCC
TTTCCTATGCATCTTTCTCAATGGCACTTGGAGGTTTCTACATTTGGACATTCACTTATC
AGCTAATAAGAAGTTCATCCTTGAAATTCAAAGCACTAAAAACAGCAGAGGAGAACGAAG
CGATTAAGGGACCAAACAATGACTCGGAGACAAATGAAAAGTCTTACCTTCTTGACAACA
ATTCTCAAGATCAGCTTCCTATTAGTACCACAAAAACAACTGAAAATCAAACAGTAGAAG
TATCATCATGGCGAAAAATAGTAGGTGTGGTACACACTTTCTTAGAAGAGCTAACAGCAC
CTCCAACACTTGGAGCTATTGTAGGATTCCTATTTGGTTCAGTTACATGGCTGAAAAATC
TGGTGATTGGGGATGCTGCTCCCCTTAGAGTTATTCAAGACTCTGTCAAGTTACTTGGGT
ATGTAGTACTAAATAAGACATTTACAATCGCGATCATGCTGCATCAACGAAAGGTTTACA
TGTTGTTTTCTTACATATCAGGGATGGAACCATTCCGTGCATCACTCTTATACTTGGAGG
CAACCTCACCCAAGGATTGAGGAAGGCACAAGTAAAACCATCAACTATAATAGCAGTAGT
TTGCGTGCGATTCATCTTCAGTCCATTGATAGGAATTGGAATTGTTAAAACAGCAGCGAA
CTTAGGGTTCCTTCCAGCAGATCCTCTGTACCATTTCGTGCTAATGCTTCAGTACACCGT
CCCACCTGCTATGAATATCAGTAAGTTATAACAATTTCATATCAACTGAATGCTGATGTT
TATGGTTTGCTTATTGAAGATGATGATGAAATGCAGGTACAATGACACAATTAGTTGATG
TAGCACAAGAGGAGTGTTCTGTTCTAATCATGTGGACTTATTTGGTAGCAGCATTAGCAC
TCACCATTTGGTCCACTGTATTTATGTGGCTCTTATCATGATAAATTACAAATCTTAGAT
ACTGAAAGCAGTATTTTTAAAAATTCTTTTATGATTGCTTGTATACTGTTCTACATTCAT
TTATGAAAATATAGAATCATTATTTCT
