Microarray Probes on PGSC0003DMT400035511
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44237_PI426222305 |
JHI_St_60k_v1 |
CTAATGCTTCAGTACACCGTCCCACCTGCTATGAATATCAGTACAATGACACAATTAGTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400035511
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400035511 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G17500.1 |
+1 |
0.0 |
530 |
253/404 (63%) |
Auxin efflux carrier family protein | chr2:7607063-7608990 FORWARD LENGTH=396 |
Transcript Sequence (2344 bp)
>PGSC0003DMT400035511 2344 pgsc_dm_v3.4
TCACTTTTTAAAAAAATTAATCGAACACTAATGATTATCTTGTCCAAGTACGCTATAAGC
CTTTCTGAGATAAAGAAACATTTAAGCTTTAATTAAAGCTTAGTATGCCGCAAATCCATT
CATTAATTGATAAATATTTAGCCCAAAAACTCATACTATTATTTTTTATATACGTAGTGA
ATTCTAATTTTCTCATGATTGGATGGGTGTAAAGTATCTTTAGCAACGCCATTGCTGATG
TAAAGTAACAGAATTGCTATTAATAGAAGTGTATCACCTGCCCCTTAGTCGTTTTCTGTC
ACGTTAGTACCACCCGTACTATATATATAGAGAGAGACATGTTTCTATTGCTGACACATG
TATTTGAACTTAACTTGACTAAGAATAACAGCAGAAAAATGTAAACTTAGAAATGTTCAA
ATTTGTTTTTTCACCGAGGGGTGGATCGAAGCAATTGCAGTGAAGAATTGATCTGAAACG
AAGTTTGGATGGTGATTATGTGAAAACATGAGTCCATGTCATGTCAAGGAACTGTTGTTT
CCTTGGTCTTTCCTATGCTTACATAAACAAATGTCACGCCCATAGGCCCATGTAACAATA
ACGATAATGTACAGAGTACGACTGGTTAGGGGGCATGGGTTTTGTCCAATTGGATGAAGT
TCATTCTCTCTTACTGGTCTTGATATTACACTATCGCGTTACTCATACCACAAGAAGGTA
GAGGTTGTTTCGAAACGAATGATGAAAAGGAGAAAGTATCATAAACAATGCACACATTAA
TTCTGTGCTTATTTATTTATATGTTCATGTATTCTTTTGTTTGTTTATTGGGGTTTAACC
ATTCCACGAATTAACATTTTTTATTTTTTTTTGGTTTGGGGATTGCAGGATATATAGACA
GAGACAGAGTTTATTAAAAGAAAAAAAAGACATTTTTGAAACTCCATAGTTAGGCATTAC
AACTAGCAAATAATATATATTTTTGTATCTACAAAATTTTGCAAAAAGAAAAAAGAAAAC
ATGGGTTTTATGACATTATTAGAAGTGGCATCAATGCCAATATTGCAAGTGCTAATAGTA
AGTGGTTTAGGAGCTGTAATGGCCACTGATTATCTTAAGCTGCTTCCTGCTGATGCCCGC
AAATACCTTAACAGAATTGTGTTTGTGGTATTTACACCGGCCCTGATGTTTGCGAGTTTG
GCCGAGTCTGTCACCTTTCAAGATATCATCACATGGTGGTTTATGCCAGTTAATGTTGGA
TTAACATTTCTATTTGGAGGGATTCTTGGATGGATAGCTATGAAAATATTGAAACCAAAG
CCACATCTTGAGGGACTCATTATTGCTACATGCTCATCAGGAAACTTGGGAAATCTTCTT
TTGATTGTCATTCCTGCAATTTGCAAAGAAGATGGAAGTCCATTTGGTGATCATAAAACT
TGTGCTTCTGTTGGCCTTTCCTATGCATCTTTCTCAATGGCACTTGGAGGTTTCTACATT
TGGACATTCACTTATCAGCTAATAAGAAGTTCATCCTTGAAATTCAAAGCACTAAAAACA
GCAGAGGAGAACGAAGCGATTAAGGGACCAAACAATGACTCGGAGACAAATGAAAAGTCT
TACCTTCTTGACAACAATTCTCAAGATCAGCTTCCTATTAGTACCACAAAAACAACTGAA
AATCAAACAGTAGAAGTATCATCATGGCGAAAAATAGTAGGTGTGGTACACACTTTCTTA
GAAGAGCTAACAGCACCTCCAACACTTGGAGCTATTGTAGGATTCCTATTTGGTTCAGTT
ACATGGCTGAAAAATCTGGTGATTGGGGATGCTGCTCCCCTTAGAGTTATTCAAGACTCT
GTCAAGTTACTTGGGGATGGAACCATTCCGTGCATCACTCTTATACTTGGAGGCAACCTC
ACCCAAGGATTGAGGAAGGCACAAGTAAAACCATCAACTATAATAGCAGTAGTTTGCGTG
CGATTCATCTTCAGTCCATTGATAGGAATTGGAATTGTTAAAACAGCAGCGAACTTAGGG
TTCCTTCCAGCAGATCCTCTGTACCATTTCGTGCTAATGCTTCAGTACACCGTCCCACCT
GCTATGAATATCAGTACAATGACACAATTAGTTGATGTAGCACAAGAGGAGTGTTCTGTT
CTAATCATGTGGACTTATTTGGTAGCAGCATTAGCACTCACCATTTGGTCCACTGTATTT
ATGTGGCTCTTATCATGATAAATTACAAATCTTAGATACTGAAAGCAGTATTTTTAAAAA
TTCTTTTATGATTGCTTGTATACTGTTCTACATTCATTTATGAAAATATAGAATCATTAT
TTCT
