Microarray Probes on PGSC0003DMT400035462
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44209_PI426222305 |
JHI_St_60k_v1 |
GCAATGAGGTCAACATTGCCTGTGCTTTCTTTTCAACATGTGTTATTACTTTTAAGTTTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400035462
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400035462 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G20170.1 |
+2 |
0.0 |
550 |
294/524 (56%) |
Domain of unknown function (DUF23) | chr4:10896810-10898794 FORWARD LENGTH=504 |
Transcript Sequence (2042 bp)
>PGSC0003DMT400035462 2042 pgsc_dm_v3.4
ATTAAATTGCAGAAATCACCATTGTTGATTTATAAGAACACAAATCACCTTCTCACAATA
CAGAATTCAGTATAGAGAGAGAGAGAGAGATAGAGAGAGAATACTGGAAAGAAGCAGTAG
CATTGTAAAGAAGAGACATCTAGATATACTCTAGAATAACCAAAAGCCTGTCTGCCTTCT
CTTTTTTTTTTCTTTTCTTCTTCTTATCTATCTCTACTGCTCTGTCGTCTGCTTATCTTT
ATATTTCAGTATGAGTAAGGAGAAAGAACGGAGGATGTTCGTTGGTGTTGTTTGGAATTG
TGCTGCTGAGCTTAAGCTTCTTCTTACTGTTTTTCTTTTTCTCTGTTCTCTTATTACACT
TCTTCACTATATCCCTTCTCGTTTAATTTCTTTCTCCCCTATAGATCTTGGCAGCTGTAT
TTCTACTCCCGCCGCCCCACTTCACTTTGTTTCCCACTTAAACGCTACTAATTCATCAAC
CCCATCTGCTACTACTCCACCACCGATGAGTGCTGCTACTCCACCACCAGAGCCGCCGTC
GTTGGAGAAAGACAGACTGCTAGAAAACGGCGTCGTTAAGAGAGCTTTCAACCCTTTTGG
CTCCGCCGCGTACAATTTTATTCTGATGTCTGCTTATAGAGGAGGTTATAACACTTTTGC
TGTAATGGGTTTAGGTTCAAAGCCTCTTCACGTCTATGGCAAACCCAGTTACCGTTGTGA
ATGGGTTTCTTCTCATAAACAGAAAAACCCCATCTCCGTCGTTGGTCACAAGATCCTCAC
GGACTGGGGTTATGGCAGGGTTTATACTGTGCTAGTCATAAATTGCACTTTCCCTGTACC
AGTTGGCAACGGCGAAACTGGCGGAAAACTTCTCGTTCACGCCACCACCAACGGCGGCGG
CGACACTAACTTTAACACCACCGACACTTTCGAGGCATTGTCGGAAACGGGACAGGATTT
TGTCAACTTTACTTCCGTATATGAAGCTCCCCCAAAGTATGATTTCTTCTACTGCGGTTC
GTCTCTGTACGGGAACTTGAGCCCACAGAGAGTAAGAGAGTGGCTGGCATTTCACGTTAG
GCTGTTCGGAGAGAAGTCCCATTTCGTAATTCACGATGCTGGAGGTGTACATGAGGGGGT
AATGGAGGTGCTTAAGCCATGGATGGATAAAGGATACGTTACATTACAGGATATTAGGGA
CCAAGAGAGATTTGATGGGTACTATCACAATCAGTTCCTTATTGTCAATGATTGCTTACA
TAGGTATAAGTTTCAAGCTAAATGGATGTTCTTCTTTGATGTGGATGAGTACATTTTTGT
ACCCAAGAAGAGCACCATTAAATCTGTAGTGAAATCTTTATCGGATTTTACACAGTTCAC
CATTGAACAGATGCCAATGTCTAACAAGCTTTGTCTCGAAGAGGACCGCGGTAAATCCTA
CAGAAAATGGGGGTTTGAGAAGCTAGTGTACAAGGACGTGAAGACGGGTATTAGGAGGGA
TCGAAAATATGCAGTACAACCTCGTAATGTGATCGCCAACGGTGTGCATATGTCTCAGAA
TACTGTAGGCAAGACAACACACAAGACAGAAGGGCGTATCAAGTACTTCCACTATCACGG
GACCATTGCAGAGCACCGTGAACCATGCCGGCAGCTGGTCAACACCACGGCAATCACCGT
TGACGGTATCCCTTATAATGTTGACACTACAATGAGAGATGTTGCTGCAACTGTTAAGAG
ATTCGAACTTAAGATGATTGGCACTACATTACAAAGAACGCGGCAATGAGGTCAACATTG
CCTGTGCTTTCTTTTCAACATGTGTTATTACTTTTAAGTTTCTTTTGGTTAGAGCTATAT
ATATATATTCTTCTCTTGTTCATTTCTGTATGATAAAATTTTCTTATACTTTTTGGAATA
GAAGCATGGGTATAGAAACAACAGTGACAAGCATATTAGTATATGATTCGTTTATTTATA
TTTGTAGGATTACAGGGTGTTTTTGTACTGTTTTGTCTTGTTTATAACACTATTTAATTT
GC
