Microarray Probes on PGSC0003DMT400035301
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26849_PI426222305 |
JHI_St_60k_v1 |
GAGGAATCCGCACTGTCTGAAGCTGCAGATGGGTTGCAGGATTCTATAGACAAAATTTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400035301
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400035301 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G40010.1 |
+1 |
2e-157 |
461 |
255/479 (53%) |
AAA-ATPase 1 | chr5:16020218-16021762 REVERSE LENGTH=514 |
Transcript Sequence (1416 bp)
>PGSC0003DMT400035301 1416 pgsc_dm_v3.4
ATGAGATTGCTACAAAGTTGGGGTGGTGTCTGGACCAGCATCGCTAGTTTCATATTCATG
TGGGATAGGATCCGTCGATACTGTCCCCCTGAGCTTATCCGAGCTTCTGATAAGTGGACA
CAAAGAATCAGGAGCTTTTTGTACCCTTATATTCAGATTTCCATCAGTGAATTCATGAGC
AACAATCTCAGGCCTCATGATGCCTATTCAGCAGTCGAGGCGTATCTCAGTGTCCACTTA
GCAAAAGAAGCAAAGAGGCTTAGAGCTGAAACGGTAAATGGTGGGAGCAAGTTGGTGCTA
AGCATGGATGAACATGAGAGAGTTACTGATGAGTTTTGCGGAGCAAAAATACAGTGGATT
TCAGGCAAACTTGTGCAACGGGAAAGTAAGTACTTGCTAGAACTGGAAAGAAAATATTAC
AAGCTTATGTTCCACAAGAAATATCGTGACATGGTAACCGATATTTACTTGGAGCAAGTG
ATCAAGGTAGGGAGAGAGATTCAGATGAGAAACAGGAAGAGAAAGCTCTACACTAATAAT
GGACACAGCAAGACCACATGGAGCCATATCGTATTTGAGCATCCTGCAACATTTGGTAGT
CTGGCAATGGAAGCAGAGAAGAAGCAAGAGATTATGGATGATCTCCTCTTGTTTAGAGAT
AGCAAGGATTTCTATGCAAGGATTGGCAAGGCGTGGAAGCGTGGTTATCTACTATATGGT
CCCCCGGGTACTGGGAAGTCTACTATGATTGCTGCAATGGCAAATTTATTGGATTATGAC
GTGTATGATCTTGAACTGACATCTGTGAGGGACAACATAGAATTGAGAAGGCTCTTAGCT
GAAACATTAAGTAAGTCTATTATAGTGATAGAAGACATTGACTGTTCACTTGATCTAACA
GGTCAAAGGAAGAAGAAAGAGAAGACTGCAAAGACCAACAAAGAAGTTCCTCGAAAGGAC
ACACAAGAGAGTGGAAGTAGAATCACTCTCTCTGGGCTTCTGAACTTCATTGACGGTCTT
TGGTCTGCATGCAGTGGAGAGCGTATAATTGTCTTTACTACAAATTATGTGGATAAGTTG
GATCCAGCTCTTACAAGAAGGGGAAGAATGGATAAGCACATCGAGCTCTCCTACTGTAGC
TTTGATGGATTCAAGGTGCTTGCAAAGAATTACCTGAGCTTGGACACACATCCCCTATTT
GAATCAATTGAAATTCTAATGACGGAGACCAAGATTATACCTGCTGATGTTGCAGAGAAC
CTGATGCCCAACTCCCTGAGAGAAGACGCAGAGAAATGCCTTCTGAAGCTGGTTGAAGCT
CTCAAACAGGCAAAACAACTGATGATAAAGAAAGACGAGGAATCCGCACTGTCTGAAGCT
GCAGATGGGTTGCAGGATTCTATAGACAAAATTTAA
