Microarray Probes on PGSC0003DMT400034348
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8668_PI426222305 |
JHI_St_60k_v1 |
GAACTTACTGGAACCATTAGAAAAGGACACGGTCAGCCTCAGTACTTAGATAAATTGCAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400034348
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400034348 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G39900.1 |
+3 |
0.0 |
890 |
452/555 (81%) |
Small GTP-binding protein | chr5:15976719-15978925 REVERSE LENGTH=663 |
Transcript Sequence (2705 bp)
>PGSC0003DMT400034348 2705 pgsc_dm_v3.4
TTTGTATTGGTCTCTCTAATCAAACAAAAAGTGAACCGCAAAGCCCTAATGTAAAACCCT
CAGCTTTGTGGTTCTTCAAACACAAATCGTGGGGAAATGACTACTTTCAAGAGAGCTTCA
AGAGCTCTCACATCCAAATTAGCTGCAATTTATACTTGCAATTTTCATCCGGTAACCTCT
TTATCGCATTTTTCTTATACTCAAAATGCTTCATTTTGCTCTCGTCCTCGCCAAAACAAT
AAAGGATCAACTATAGATTTGAATCAGTACCCTTCTGATAACATTCGTAACTTTTCAATT
ATTGCCCATGTTGATCATGGAAAATCAACCTTAGCTGACAGACTTCTGGAACTTACTGGA
ACCATTAGAAAAGGACACGGTCAGCCTCAGTACTTAGATAAATTGCAGAGAGGGAACGGG
GAATAACTGTTAAAGCCCAAACAGCAACTATGTTCCATCGTCACAAGTTCCTTGGCAGTG
ACACAGATTTTTTGTTGAACCTTATTGACACACCTGGGCATGTGGATTTTAGCTATGAAG
TATCCAGATCTTTGGCAGCTTGTCAAGGTGCCCTTTTGGTTGTTGATGCAGCCCAAGGTG
TGCAGGCACAGACTGTTGCTAATTTTTACCTCGCGTTTGAATCAAACCTGGCCATAATTC
CTGTCATAAATAAAATTGATCAACCCACTGCTGATCCAGATCGGGTAAAAGCACAGCTCA
AATCTATGTTTGACCTTAATCCAAGTGATGTACTATTGACATCAGCAAAAACTGGTCTAG
GTCTAGAGCAGGTTCTTCCTGCTGCAATAGAGAGAATTCCTCCACCCCCTGGAAAAAGCA
CTTCACCTTTGCGAATGCTTTTGCTGGATTCATATTATGATGAGTACAAAGGAGTTATCT
GCCATGTGTCTATTGTTGATGGTGCTCTGCACAAGGGTGACAAGATTTGCTCTGCTGCGA
CTGGCCAAAGTTATGAAGTTTCCGATGTTGGTATCATGCACCCAGAACTTGTGGCGACAG
GAATCCTTTTAACAGGTCAAGTTGGATATATAGTCAGCGGAATGCGTTCAACAAAAGAGG
CCCGTGTTGGAGATACTCTACATCATACACGAACAGTTATACAGCCCCTTCCAGGTTTCA
AGCCAGCAAAACATATGGTCTTTTCTGGCCTATATCCAGCTGATGGATCTGATTTTGAGG
CACTTAACCATGCCATAGAGAGACTGACGTGTAATGATGCCAGCGTCTCTGTAACTAAAG
AAAGCAGCACAGCTCTAGGTCTGGGTTTCAGATGTGGTTTCTTGGGCTTACTTCACATGG
ATGTTTTTCATCAGCGACTTGAGCAGGAACATGGAGCACATGTCATTTCCACTGTTCCTA
CAGTGCCATATATTTTTGAGTACTCAGATGGAAGCAAATTACAGGTTCAGAATCCAGCTG
CTTTGCCTTCAAACCCCAAAAATAGACTCATTGCCTGCTGGGAACCTACTGTGTTAGCTA
CTATTATAATCCCTAGTGAGTATGTGGGGTCTGTTATCACTTTATGCGCTGAGCGTCGCG
GGGAGCAATTGGAGTACTCATTCATTGATAGCCAGCGAGCTTTCATGAAGTATCGCATGC
CTCTGAGGGAAATTGTTGTGGACTTCTACAATGAATTGAAAAGTATAACATCAGGATATG
CTTCGTTTGATTATGAGGATTCAGAATATCAGGCTTCGGATTTGGTGAAGCTGGATATTC
TCCTTAATGGCCAACCAGTTGATGCCATGGCAACCATTGTCCACAAATCAAAAGCTCCAC
GTGTTGGCCGTGAACTTGTGGAGAAGCTTAAAACATTTATAGACAGGCAGATGTTTGAAA
TTATCATACAAGCTGCTATTGGATCTAAGGTCATAGCCCGGGAGACGCTTTCTGCTATGA
GAAAAAATGTTCTGGCAAAGTGTTATGGTGGTGATGTTACAAGAAAGAGGAAGTTGTTGG
AGAAACAGAAAGAAGGGAAGAAGCGAATGAAGCGAGTGGGATCCGTCGATATACCCCAAG
AGGCATTCCACGAGTTACTCAAGGTCTCATGAAGACTATCTTAAATGCCTTCTAGATTTC
TAGATACAAAAGCGTAAGATGTCGTCATATACGATGATGGATACCCACACAGTTGATGTT
GTACAATCACTAAGTTCCATTGCACAAGCTACCTTTGTTAGACGAGTGGATGAAGATAAA
GTTCAACGGGTATGACTATAAAACCCCAATTTTATCCTCATTTTATCCCTGGAGACATAC
AAATGTTTTGTTGTGGTCAAAGTTGACCCCTTTTTTCATGTGTTGGAGGTGGGATAATTT
AAGCCATTGAATAACCCTTTTTGATGACATTATTGTTGGAAGAAAGATCAAATCAGGTCT
CTATTGGTCCATCGTACAACATGGATCTCAGCTGCATACTCTGCAATATTTGAATTCAGA
AGTATACCAAGTGCCATGGTAGAAAATTTTCTTGCTAGAATTGATAGGGACGTGACATTT
CCTTATTCGTATCGTCCAAATCGTTAGAGGGTGGCATAAATTGAGTCCTAATAATGTAGT
TGATTGAATTTGGAACTAGATTATGGAAAACTTGATTGTTAACGTTGCTTGTCGTCCCAG
ATTTTAACCGTATGATGTAACAACTTTGGTTGAAATTGGTAACGGCATTGATTCTTCATT
CCGTC
