Microarray Probes on PGSC0003DMT400034336
Probe ID | Chip | Probe Sequence |
---|
CUST_51414_PI426222305 |
JHI_St_60k_v1 |
TTCCATCTCCTTTCTGTTTTCAGTTGGTAAAAAGGTTTGAGCAGGGACGGAGCTAGGAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400034336
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400034336 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G33260.1 |
+1 |
5e-94 |
293 |
156/324 (48%) |
Protein kinase superfamily protein | chr1:12064796-12066114 FORWARD LENGTH=349 |
Transcript Sequence (1539 bp)
>PGSC0003DMT400034336 1539 pgsc_dm_v3.4
GTGCTGATTAATTTGAATTTGTATCTAGTAGGCCGGAAAAACTCTTGCTTGAAGTCAGAG
ACTTCTGATTAAGGATCGAAAGATTAATTCAAACTATCATCCCACCAAGCCTTTGAGTTT
TGTTTCCATTTTTTAACTATTCGATTTTCGTAGTTTGGCCTGATTAATTTGGATTTGCAG
TGGTTGCTCTCTACTAAGAAATTCTCCTTTCTTAGGCTTGAAGTCAGAGATTTCTAGTTA
AGGACCGAGAGATTCCAACGTCCATCTCACATAGCACAAACACGTCGAATTGGTGCTCTG
CCTAGTTTTTTTTTTGTGTCCATTATGGCTTTCCTTAGGTGCTTTGGGTACAACGTAAGG
CGCGCTGGAGTTGCTGATATCCGTGTTTTCACAGAAGGCGATAAAGAAGATGAATCAGAT
AACACAATGATTGCTGATGCAACGAGATATACAAGTGAAGAGTTGAAGAAATTCACCGCG
AATTTCTCCAATTCCAATTTAATTGCCTGTGGTGGATTTAGCAGAGTCTATTTAGCTAAT
TTCCCTGATTCATCACTCCGAGCTGTCAAAATCATGGACAGCAGCAGCGAGCGTCTCAAT
AGAATCTACAAGCAAGAATTAGACATTTTGATTCAAATCAAACACGACAACATAGTTAAA
CTTCTTGATCATTGTGAAAATGATGAATCTGGAAACATGCTCGTGTTCGAGTATGTCTCA
AATGGTACTCTACAGGACAAACTCCACGAAAACAGAGATATGACAATTCTTCCATGGAGA
AACCGAATGGCCGTAGCATTTCAACTTGCTCAAGCTATTGAGTATCTTCATGACAAATGT
CCTTTACAAATTGTGCATAGCGATATCAAGTCCTCTAATATATTGCTAGACGATCAATTC
AATTGCAAGCTTTGTGATTTTGGGTCCGCGAAAATTGGATTTTCTTCTTCAGTTTCACCA
TTAACGAAAAATCGAGTGATACTTGGTTCTCCAGGTTATACTGATCCTCACTACTTGAGG
ACCGGCATTGCCTCCAAGAAAAACGACATATATAGCTTTGGAGTCATTATTTTAGAACTC
ATTTCAGGGGTTGAGGCCTTTTCCTCAGGTAGTGGGGAGAGGTTAATATCGAAAGCTGCT
CCGATTTTGAACGATGTGTCTAAGGTAGCGGAAATGATAGATCCACGCCTCGATAGGAAT
CACGTATTGGAGGAAGCTAAGGCCATGGTGTCACTTGCAGCATTATGCCTAAGTGATTTC
CCAGGCCTCAGACCCTCTGCTTCTGAAGTTTTGGAGAATATGAGAAGTAGAATATCTTCC
ATCTCCTTTCTGTTTTCAGTTGGTAAAAAGGTTTGAGCAGGGACGGAGCTAGGAAGGGCC
AAGGGGTTCATCCGAAACCCCTTCAGTGAAAAATTATATTATTTATATATGATTAAAATT
ACAACAATATTTATGTGTGATACTAGTTAAAGGTTCATGTAAATTTGTATAGGGATTTGT
CACAATTGAAAGTTTTGTCATAGCTAGGTAAAGAATTAG