Microarray Probes on PGSC0003DMT400034089
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_19908_PI426222305 |
JHI_St_60k_v1 |
GTCAGCAGATCTATCCGTGACTTTAGTTCAATAGGATTTTCTTTTTGTATAGGAACTAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400034089
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400034089 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G36930.2 |
+2 |
6e-100 |
349 |
206/528 (39%) |
Disease resistance protein (TIR-NBS-LRR class) family | chr5:14567771-14571916 REVERSE LENGTH=1191 |
Transcript Sequence (4561 bp)
>PGSC0003DMT400034089 4561 pgsc_dm_v3.4
CTAATCTGTTTTAAAAATATATTACATGGGTTGACTTGGGGAAGATAAGCGCTGTGCATC
TTCGTTTGAATTTCCGATGGGGTTCTTCTTGTGCAGTGCTTCGCCTGTGCATAATAACCA
TCCAAGAATTCAATTACTTAAGCTTAATCCTGGTTGATAATCGCAGTATCATATACAAAA
CAAGATTAAAGAGCATCTTCATATAGAGCTTTGATCTATATTCATGATGAGAGTTGAAAA
GGCATCAGTCTCCAGGCCTAGATGCTCTTATCATGTCTACTTGAGTTATAGAGGCAAAGA
GATCAGCGTGAACTTTATCAATATCCTACACACTGCATTGACTGATGTTGGTATTCAAAC
ATTCAAGAGACACAGTGAAGCTAGAAAAGGAAAGATTGTTGGATCAGAATTGCAAAAGGC
AGTCAAAGAATCGAGGATTTCAATAATTGTATTCACGGAAGATTATGGATATTCTAGAAG
GTGCCTAGATGAACTTGTGAACATCCTTGAAAGGAAGCAAAGTGCTGGTCATATGATTCT
ACCTGTGTTCTATCGTGTAGATCCATCCCATATTAGAAAGCAGAGAGAGTCGTATGCGAA
AGCATTTCATAATTACGAAGAGCAGATCATGGCGAAGAAGGTTGAAAGAAGGAATGAGCA
CATAGCAAAGATAAAGATATGGAGATCATCTCTCACAGAGGTTGCAAATATGGCAGGGAT
AGTTCTAGAAGACGGGGATGAGCTGAAGTTTATTCAAGAAATTGTTGAGGACATTTGGGG
TAAGCTGTCTCGTAAAGTTTTGAGTTTCGCCCCATATCCAGTTGGAATATACTCCCGTGT
AAAAGAGATTAATTTCTGGTTACAAGATAGCTCGACTAATTCTCGCACATTGATGATTTA
TGGAGAACCTGGAATAGGGAAAACAACCATTGCCAAAGCTCTTTTTAACCTACATTGTGA
CAGATTTCAATGCAGCAGATTTCTTGGAGATATTAGAGAAATTGCAAAAGAAAGCTGTGG
TCTGATTAACCTACAGAAAAATCTTCTTTCTGATCTTTTGAAAGAGGATAAGATTGATCT
AAATGATATTGATAGAGGAGCTTCCACGATCAAAGAATGTTTAGTCCACAAAAAGTTTCT
TCTTGTTCTTGATGATGTTGATGATTTGAACCAACTGAAAGGACTTCTTGATTCAAGAGA
GTGGATTCCTCCAGGGAGTAAAGTTATTATAACAACTACAAACGAACACTTGCTAAACCC
TCTTGATGCTTGTGTGATGTATGAAACCAAGAGGATGAACAATTATGAGGCGCTTAAGCT
CTTCAGCTTGCATACTTTTGGTCAAGACCATCCCGTCAAGGAGTACATGAAACACTCCAA
GCAGATAGTTAAACATTGTCGAGGGCTTCCTTTAGCTCTTCAGGTTCTAGCCTCTTCGCT
ACGTGGTGGAAGTATAGATATGTGGGAAGGTGCAATACAGAAATTAGAAAGATATTCTGA
ATGCCATAACCATAAAGTTCTTGAACTAAGCTATGAAGCTTTGCCAGATGATCATGATAA
AAATGTATTTCTTGATATTGCTTGCTTTTTTGTCGGGAAGGACAAAGATTATACAATCAA
AGTTCTGGATGAATGTGGTTTCCATGCTACTGCTGAAATACAGAATCTCATTGATAGATA
TCTCCTGACAGTGACTCCTGATAACAAGCTAATGATGCATCAGTTACTACAGGAAATGGG
TAAAGAGGTCATCTGCCGAGAATCACCCATTGAACCTGGTAAACGCAGCAGAATCTGGCA
TCACAAGGATGCCCTTAGTATACTGCATGAAGAAACTGTAAGGCTCATTCCTCCTGTACC
AATTTCGTTATTTTTCCTGGAGCTCATTTTCACTTCAACGTTACTTTCCATGTCAGGTTA
CAGAATCTATTGAAGGGCTTGTTCTTAAAATGTGTGGATCAGATGAAAGCAAACCAGACA
GACATGAAAGTATATCAAAAAGACCTTACTTCAATGATTCACAGAGCACTTCAACATTGA
CTCTCAAGAAAAATTCATCAAAGAGGCTTCGCGTAGGATGCCTCTCTTGGGGTCTGGGGA
ATTCTGTTTTGGCAAGATCACAGACTGTACAAAATGAAGCTGGAATGAGTGCTAAAGCAT
TTTCTAAAATGCAAGAATTGAGATATCTTGAGCTTGAGAATGTCCAGCTTTCTGGCACCT
TTGAAGGATTTCCAAAGAAATTAAGATGGATGCGCTGGTATGGACGATTCCAATCAACAT
CCTTCCCAAATGGCTTTCCTCATGAAAATCTTGTAGTTCTTGAAATGAACAATAGCAACT
TGCATCAAACCTGGGAGGGAGCAAAGTCTCTACGATCATTGAAGATACTTGATCTTGGTC
ACTCACACAGTCTCATGAAGACCCCTGATTTCTCTGGAATGCCGAATCTAGAAAGAGTGA
TTCTTGAAGATTGCATAAATTTGGTTAAGGTCCATGAGTCCATTGGAAGACTCCATAAAC
TTCTTGTCTTAAATCTGAAGGGATGCGAGAGCCTTAAGAAGCTTCCAAGGAAAATTTGGG
AAATCAAATCCTTACAAGAACTAACACTCTGTGGGTGCTCAAAGCTGGAGCTTTCCAGGA
TTATGAGAAATGGTAAGTTTTTGCAAGCACTTACACGGGATGTGACTAACAGAGATCAAT
TTTCCTCTAAGGCTGAAAAGCCAATATGCAGCGACTCTCTGTCTGCTAAATCAGTCTATT
CAATCTTCTGGTCTTGGATGTCACTGTGGCCAAAGTCAGCAGGTTCAATGTCAGATATCT
TCCAGATCACCTTACAAAGTTTGGATATTTCACATAGCAATCTGACCGACACTCTTATTC
CCTACGACCTTTCTGTCCTATCCTCCTTGAAATATCTGAGTCTAAGAGGAAATCCCATTT
CCACCCTGCCGGAGAGCCTGAAGAGCCTAACTATGCTGCAGTCCCTTCAGTTAGCCGACT
GCACAAGGCTCCAGTGGATCCCTGAGCTTCCGTTGAGCTTACAAATATTGAATGCAAGTA
ACTGCAGATCACTGAACAAAGTAACAAATTTACCCAATTTCATGAGGTCACTTGACTTGC
ACTTAGAGAATTGTGAAAAACTGGTTGAGGTTCAGGGAGTATTCAAGCTAGATCCTATTA
GAGACATTGATGATATCCTCGATATGTCTTGCCTAGATAATTTGGAGGTCAGAGCAGTAG
ATGTGGAACTTTGCAACTATCTGTCCTCAACAAAAAGCAAAGGTCCCCTTCAGGGACTAT
ACGAGTTTGGTATACACAACATTTACATTCCTGGAGTCAAGGTTCCTACCGAGTTCAGCA
ATATAAGCACAGGGAGCTCAATAGATTTCACTGTGCCTCCACTTCCTAATGCTAAGATCC
AAGGATTAAAGATATGTGTTGCTTATGCAGAATGTCTTGAAGAATGTTTCAGTGAAAGAC
ACTTCATAAAAGTGAGCAATAAGACCAAGGGAATCAAATGGATTTATGGTCCAACAATTT
TTGGAATTGCAGGTCCTGGTAATCCAATGCTATGGTTTAGTCATTGGAAGTTTGGAAACC
AGCTAGAAAGAGGAGATCAAGTTGTTGTTTCAGTAAGCATGGGTTGCTTAGTTAAGAAAT
TTGGTGTATATCTTGTATGCAGCGAACAAAGTGAGGAAGAGGAAGACACCCTATCTAATG
CAGAAGGATGTCGCCGTCTTTCCTATCCACTACAGCATGCAATTGGTGGAGATTTGTCTC
CTTATGAGCTAAGTTCAGGGATATTTTCGACTGACCACCCCAAAATGGACATTTTTGCGA
GTGACCCCGTGAATATTGACCGCTCCTTGCACCTAACCAATGGGCCGGATAGATGAACCT
GGCCATGATGGCCCAGATTCCGTTTTGGGTAGGTTGATCTACTTAGCAAAGTCAGCAATT
TGAAGTTATCCATATTGGGGATTAACTGTTCCCTTCAAAATCCTACTTCTAGTAAATTAC
GTTGTAAAACCTAACAAAAATACCAGAGACGAAATTAGGATTTTTCATTTGAATTCTAGA
AAACACAGCTTACATATTTGAGTCAGGTTCTGTGAAAGTAGCAGGAGGAATGGCCCTAAT
CTAAACAATGGAAGAAAGTTCATATTTATGATCCTCGTTCATATACTCGTAATTTCTGCG
ATATTTATCCTCCTCACTGTGATCCCAAGCAATGGCAATGGCAATGTCGACAACGAGGAT
AAGCTGTCACTTACAGAGTTATGCGTGAAGCATTATTTTAGTCCAAAACGGCCTGAAATA
ATACAAAGTAGTAGTACTACTGTTAATTTGAATGCAGAGACTTGTTTCGTCGGAATATTG
TTTGAGTGGAAAATTTGATCCTGAATTCGTCGGAGCTCTCAGAAAATTCGTTCCAAAATT
CAACAAAAAGGAAGATTTCTTAGTCGCATCACTCGATGTCAGCAGATCTATCCGTGACTT
TAGTTCAATAGGATTTTCTTTTTGTATAGGAACTAGAAATTAACTAGGTTTTTTGTTTTT
C
