Microarray Probes on PGSC0003DMT400033769
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42778_PI426222305 |
JHI_St_60k_v1 |
GCTGAGATTTTTCCAGTTGGTGCATATATTGCGTACTTAGTCAATATATCATAGCTACAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400033769
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400033769 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G13340.1 |
+1 |
4e-67 |
227 |
116/185 (63%) |
Regulator of Vps4 activity in the MVB pathway protein | chr1:4569622-4571043 REVERSE LENGTH=409 |
Transcript Sequence (1799 bp)
>PGSC0003DMT400033769 1799 pgsc_dm_v3.4
TGAGCTAGTTTCATTTGTTCCTATCTTCTAGTCTCTTCAACAACCACCAACCATTAAAAA
AAAAAACTCTTATTGTGTTCAAATTTATAAGAGTTTATACTTCTCTTTCTTTTACTTGTT
TCTCATTGAGTGAGGAAACAAACAAGTGAAAGGGAAGTAGCCATGGGAAGAAAACTTGAT
GCTTTACTAGGAAGAAACTTTAAAATTAGTAAATTCAAGGCCACTGCAAATTTAGCCATT
TCCAGGGTTACTGTACTCAAGAACCAACGCCAAGCACGGTGCTCGATCGCGCGGTCTGAT
GTGGTTCAGCTCTTAAACCTTGGTTTCCATGAAAGAGCTCTTCTAAGGGTTGAGCAAGTG
ATCAAGGAACAAAATATGTTGGATGTGTTTGACATGATAGAAGGCTATTGTCTTCTCACT
ATTGAAAGAACCAACCTTATTCAACAAGAGAAAATATGTCCTGAGGAACTGAAGGAGGCG
ATATCGAGCTTGATTTTTGCAGCTTCAAGGTGTGGTGAGTTCCCAGAACTTCAGGAGCTT
CGAGCAATTTTCACGTCAAGATTTGGGAAAGAATTCGCAGCTCGTGCTGTTGAGTTAAGA
AACAATTGTGGAGTAAATACAAAGATGATACAAAAGCTGTCAAAAAGGATGCCTAGCTTA
GAACAAAGGACCAAAGTGCTTAAGGAAATTGCAGCAGAGAATAACATTGTTTTGAAAATT
GAGGAAATAATTTTGGAAAATACAGAGGAGGAGGAGGTCATCGCGAAAAGGAAGGACCAG
CCTGAAGATCACATACCAGTTTTACCTCAAAATGTAGACCATGAAGCTAGGAGAAAATAT
AAAGATGTAGCAGCTGCAGCTCAAGCAGCTTTTGAATCTGCTGCTTATGCAGCAGTAGCT
GCCAGAGCAGCTGTGGAACTCTCTCGGTCTGAATCACGTGATCTGGATGACCCCAAGAGT
CCGAGTCAGAAGCCAAGGAATGTATCGGACTCTCGTGAGGATTTGAAATCTGAGTTTCAT
GCAGGAGAGGAGAAGAATAATGAGGGAGTTGAGAAAATTGAGACTAGTCAGAACTATGGT
TTTCATTCTGAAGTCGACCAATTCTCCGATGGAGATGAGGTGGAAGAACTCAAACAGAGG
AAGTTTGAAGAACAGTTCAAGAGATCAGTCTCTGTTTCAAGTTCTGATATTTCAGCAGAC
GACATTCTTGTTGATGAGGTGAAAAGTCCAAGACATGGTGTAGTTTATGATGAAATAGAT
GAAGAAGTTGGAGAGGAAAACAGAATCCCATCATTAAAACGTCCTAAGAATGAAGTTTTT
GGTTCTCCGGTGCACCAAGCAGGAAATGAGAAGGAGATTGAAGGATTCACAAAGCAAGGT
GCAGAAAAACTAGATATAAATAAGAAGCCAATATCAATGAGAACAAGAAAGAACCTTCAC
TGGTGAACCAAGATCGGTTATATGTTAACGAAAAGGAGATTGAAGGATTCACAAAGCAAG
GTACAGAAAACCTATACATAAATAAGAAGCCAATATCAGTGAGAACTAGAAAAAAGTATC
ACTAGAGACCAAGGATGAATAAATGTTTGCTGAGATTTTTCCAGTTGGTGCATATATTGC
GTACTTAGTCAATATATCATAGCTACATATTTTCTTTAGCTTTGGAGATTTTGTAAGTTT
GCAGATATATTTTGTGCTTTTGTCAATATAATGTAGCTTCATATTTTGTTTGCTTGATTA
AGACAAATGCTGTGATATTTTATAATAATCGAAGCTACAGCCAGACACATAAATTCTTT
