Microarray Probes on PGSC0003DMT400033385
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8944_PI426222305 |
JHI_St_60k_v1 |
GACCTCAACCTGATAAAGGCCTTGGCAAACTTAGAAAGTCCATTACTCTAATCCAAACTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400033385
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400033385 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G33830.2 |
+3 |
2e-32 |
117 |
60/123 (49%) |
Dormancy/auxin associated family protein | chr2:14309768-14310286 REVERSE LENGTH=108 |
Transcript Sequence (733 bp)
>PGSC0003DMT400033385 733 pgsc_dm_v3.4
TTTTATTTATACTTCTACTAGGTAAACAACCATTTTTACATTTCAGAGTTAAAAGAGAAA
AGAGAAAAAAGAAAAAGATGGTGTTAATTGAAAAGCTTTGGGATGATGTTATGGCTGGAC
CTCAACCTGATAAAGGCCTTGGCAAACTTAGAAAGTCCATTACTCTAATCCAAACTCATG
GCGGGGAAGGAGGAGAAGGAGCAAGCAAGAGCTACCAAAGGTCTTTGTCTATGCCGGGCT
CGGGCTCAGGCTTATCGAGCCCGGGGACACCAGGAACCCCAGTGACCCCAAACACTTACT
CGCCATCGGCGCGTAAAGATAATGTGTGGAGGAGCGTGTTCAATCCGGGGAGCAACATTG
CCACCAAGAGAATTGGTGCTGAAGTCTTTGACAAACCGTCTCACCCCAATGCTCCCACTG
TTTATGATTGGCTCTACAGTGGGGATACCCGATCCAAGCATCAGTGAAATGAAAGAATAA
GAGATTTTGGATCGTGACAGAGCGGTATCTGAATAATGTTACATGTAAATAACGTATTTT
CCTTTTAATGTACAAGTTGCTATGCTACAGAAACATGGAGATTAATTAGTGGATGTTAAT
CCTATGTTTTCTGTCAATGCCTTATTATAAGTATTAATTAACTAGTACTAATATATGTGT
AATTAGGTTTTGATGAAAGCTAACTTGAGTATATTCAGTGGCTTTCTAGCTACTGCTACT
ACTATTATATCCA
