Microarray Probes on PGSC0003DMT400033335
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28888_PI426222305 |
JHI_St_60k_v1 |
GGCTGTTCCAACTTATAGGCTACAACACAACTGATTTTGGGAAATTGGTTTTGATATATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400033335
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400033335 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G36220.1 |
+1 |
2e-102 |
322 |
178/467 (38%) |
ferulic acid 5-hydroxylase 1 | chr4:17137584-17139619 REVERSE LENGTH=520 |
Transcript Sequence (1657 bp)
>PGSC0003DMT400033335 1657 pgsc_dm_v3.4
TGCAAATATTGTCTATTATTTGTCTTATTATTATTTGCAATGGCTTTTGTGTGGGCAACA
TTCATTTTGGCTCTAATTTTATTATTCATTTTCTATGAGTTACTAAATATCAAAAACAAG
AAAAAACTTCCTCCTGGTCCAAAAGGCATTCCAATATTAGGACATCTCCATCTTTTAGGT
GAAAATCTTACTCATGATTTACACAAATTTTCTCTAAAATATGGTCCTATCATCTACATG
AAATTTGGATTGGTACCAACTTATGTTATATCTTCCCCTGAATCAGCAGAAAAAATTCTC
AAAACTTATGATCATATTTTTGCTAGTAGGCCTCATAACGAGACCGCTCAATACATATCG
TATGGCCAAAGGAATTTGATTTTCTCAAAGTATGGCGCGTATTGGCGTAACATGAGAAAA
TTGTGTACGGTCCATTTGTTGAGTAACATGAAGATTAACTCATTCCAATCTACTAGAAGT
GAAGAAATTGCCATTATGATCAAATCGATCAAAGAAATAGCTCAAGGTCGTCGTGTTGAT
GTTGATCTTAGTGCTCAAGTGTCGAAGTTGAGTGCCAACTTGAGTTGCTTAATGGTTTTT
GGGAAAAAGTTCACGGATGACGATTTGGACAAAAGGGGATTTAAGTATTTAGTTCAAGAG
GTTACAACTCTAGCTGCAACACCAAATCTTGGTGATTTTTTCCCTTTTCTTGGTGTTATT
GACCTCCAAGGACTCACACGTAGAATGAAGGACACTTCTAAGGTGCTTGATCCATTTGTA
GAGAAGATTATTGATGAACATGTCAATGCTAAGGACCACAAGAAAAATAAAGACTTCGTA
GACACTATGATGGAAATTATGCAATCTGGTGAAGCAGAGTTCCAGTTTGATCGTCGCCAT
GTCAAAGCTGTCATGTTGGACATGCTTGTGGCATCAATAGATACATCATCAAGTTCAATT
GAATGGATGCTGTCAGAGCTTCTAAGAAATCCAGACATAATGAAGAAACTCCAAAAAGAA
TTAGAAGAAGTAGTAGGCCTAAACAGAATGGTACAAGAATCAGACTTAGAAAACTTAAAA
TACTTAAACATGGTATTTAAAGAGTCATTTAGGCTACATGCTGCTGCCCCATTACTACTT
CATGAAGCCATGGAAGATTGTATGGTAGATGATTTCTATATCAAAAAAGGATCACAAGTT
ATTGTCAATGCATACACTATTCATAGGGATCCTAATTTTTGGACTGACGCTGATAAGTTT
TTGCCAGAGAGATTTCTTGAAAGTAACGTAGATGTTCGTGGACGTGATTATCAACTTTTA
CCATTTGGTTCTGGCAGAAGAAGTTTCCCCGGGATGCAATTGGCATTAATTATTGTTCGT
CTTGTTGTAGCACAATTGGTTCATTGCTTTGATTGGGAACTCCCAAATGAGATGCAGCCT
AAGGATTTGGACATGACTGAGCAATTTGGTATAGTTACAGGCAGGGCAAATCATTTGATG
GCTGTTCCAACTTATAGGCTACAACACAACTGATTTTGGGAAATTGGTTTTGATATATAT
CTAATTATAATATGACGTTTGACTTTTTATTATAGTGTATTTTTTTTTTAGTTATTTTGA
TTAAGTTCTTCTTAGTATGCACTTGTAATAGTACGGG
