Microarray Probes on PGSC0003DMT400033320
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28871_PI426222305 |
JHI_St_60k_v1 |
TGGGTCTTGCAGCCATTAATGGGGTCTTTTCTGCTTGAACAAACAAGAAAAAATGGCAGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400033320
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400033320 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G65207.1 |
+1 |
1e-06 |
44 |
34/82 (41%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:26052364-26052585 REVERSE LENGTH=73 |
Transcript Sequence (496 bp)
>PGSC0003DMT400033320 496 pgsc_dm_v3.4
CCAAAATATCCAACAATTTATTTCATTACACATCAAATTAAAAGTTGTCCAAATCAAATT
TTACAATTTAGTAGTATGGCTGATATTGCTATGTTGGTTGCAGAAGAGTATGAAAGGAGA
GTGAAGAATTCAAGAAAATTTGGATCTGAAGAAGAGATTCAATTATTCTCTTATTTCTCT
GAAATTTTAGCTCAAAAATTTGATGGGTATTCTTCCAAAATCAACATGACTTTTGGAGAA
ACCAAAATTATTGAGCCTAAAAGTGAAGTGGGTCTTGCAGCCATTAATGGGGTCTTTTCT
GCTTGAACAAACAAGAAAAAATGGCAGCTAATTTACTTTTTTTTTTATTTTTTTTAATTT
TGCATAATTATGAAGAGGAAAAAAAGTAGTTGTAAATGTCAGTTTAAGTTTTTTTTTTTT
TGGGTCTATAGAATGGTAACTATTTCAGCTGCTAATTCTGTTGTTTGTTCTTCATGTAAT
TTATGCAATTCACAAT
