Microarray Probes on PGSC0003DMT400033307
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28875_PI426222305 |
JHI_St_60k_v1 |
TATATTTCATAAGGATTGTTTGGACACGTGGCTCCAACAGGATTCTGCCACGTGTCCACT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400033307
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400033307 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G61460.1 |
+1 |
4e-18 |
79 |
35/82 (43%) |
brassinosteroid-responsive RING-H2 | chr3:22741701-22742213 REVERSE LENGTH=170 |
Transcript Sequence (646 bp)
>PGSC0003DMT400033307 646 pgsc_dm_v3.4
CGGGTGCAAACCTAAATGTACTAAAAAAGAAGAAACTTCTCTTTCTTTCTATACACAATA
ATGGCTGCCCTTTCTCAGCTGTTAGCTCATATCTACACCATGACTCTAGTCTTCTTCACC
ATTCTAATCCTCGAACTCGTAATCTTTGTACGCTCCATAACCGAGACAATCTCCGATTCC
GGCCGCGGCCGCCCCATCACCACCAAGCAATACATCAAACTCATCGATGAAAAAAACCCG
GTCAGCCGGTTCAAAACCGCATCAATCAACCCGGACGGTTTTTCCGATACCTGTGCGGTT
TGTTTATCGGCATTTGAAGACGGCGAACAAGTACGGAAGTTGAAATGCAAGCATATATTT
CATAAGGATTGTTTGGACACGTGGCTCCAACAGGATTCTGCCACGTGTCCACTCTGCCGG
AATAAGGTGCTGCCGGAGGAAATTGTGGTTAAATTCCGGCAGCACCGCAACCACCACACG
GAGTATGAAGGGAGTGATGAGGAGCTGATTTTTTTGTTATCTGCATTACATGGTAATTAT
ATTCGTAGATTTTTATAAATTATTAGGAAAATTTTTGTAATTTTTTTTTTGTATATAAAA
AGATTTAGAATATTAAAAAAAGAAAGTAATTAGTACAATAATTGAG
