Microarray Probes on PGSC0003DMT400033123
Probe ID | Chip | Probe Sequence |
---|
CUST_34140_PI426222305 |
JHI_St_60k_v1 |
TACATTGAATACCTAAAAACTGGCAGCGACTCTGATGCTTGTGCTAGGGGATTTGATTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400033123
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400033123 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G41510.1 |
+1 |
4e-171 |
494 |
245/368 (67%) |
cytokinin oxidase/dehydrogenase 1 | chr2:17314626-17316861 FORWARD LENGTH=575 |
Transcript Sequence (1182 bp)
>PGSC0003DMT400033123 1182 pgsc_dm_v3.4
ATGCTTCTAAGGATTCTTATATTCATACTAGGCATTTGCTCAATAAACAGAAGTAACCTC
TGTTGTGACCAACTTTTTGCCACCCCTTCAAGTTTCTCAGTGATTCAATCATCACTGAAA
CAGTTAAAGATTGAAGGGTACTTTAGTTTCAAGAATTTCGATCACGTCGCCAAGGATTTC
GGCAACAGATATCACTTCCTTCCATCAGCTGTTCTGTACCCGAAATCGGTTTCAGACATA
TCATCCACTTTAAAACATATTTTTGACATGGGAACAACAACTGACCTAACTGTTGCTGCT
AGAGGACATGGTCACTCTCTAGAAGGACAAGCTCAAGCTTACCGGGGAGTAGTGATCAGC
ATGGAATCGCTTCGAGCACCAGCTATGCGTTTCCACCATGCAGGGGAACTGCCTTTTATT
GATGTCTCTGCCGGAGAACTTTGGATAAACATCCTGCATGAAAGTCTTAAACTTGGATTA
ACACCAAAATCTTGGACTGATTATCTTCACCTTACAGTTGGAGGTACTTTGTCGAATGCC
GGAATCAGCGGGCAAGCATTCAAACATGGACCTCAGATAAATAATGTCTACCAACTTGAA
GTTGTCACTGGTAAAGGAGAGGTGATTACTTGTTCAAAGGAGCAGAATGCTGACCTGTTC
TATGGTGTACTAGGAGGACTAGGCCAGTTTGGTATCATCACAAGGGCTAGGATTGCTCTT
CAACCAGCACCTAAAAAGGTAAAGTGGATCAGAGTGCTGTATTCAGATTTCTCAACATTT
TCCAATGATCAAGAACAGTTGATATCATCCAAGGATTCTTTCGACTATGTAGAAGGATTT
GTTATTATCAATAGAACAGGATTGCTGAACAACTGGAGGTCTACTTTCAATCCTAAAGAT
CCACTTCTAGCCAGAAAGTTCAGTTCTGAAGGAAAAGTTCTCTACTGCCTAGAAGTTGCC
AAATACTTCAATCCAGAAGACACCCCTAATACTGATCAGAATATTGATGTCCTCTTATCT
AAGTTGAATTATATCGAATCCACGCTGTTCCAATCAGAAGTCTCCTACGTGGAATTCCTT
GACAGAGTCCACGTCATTCTTTTTCAGAAAGAACTATCTTTGTACATTGAATACCTAAAA
ACTGGCAGCGACTCTGATGCTTGTGCTAGGGGATTTGATTAA