Microarray Probes on PGSC0003DMT400033082
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_34153_PI426222305 |
JHI_St_60k_v1 |
CAAGGCCTTGTTCGGCTGCATATTTGTATGTAATTGTACTTTTTCATGAATTCGTTGTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400033082
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400033082 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G36430.1 |
+2 |
3e-25 |
109 |
110/421 (26%) |
Plant protein of unknown function (DUF247) | chr2:15290211-15291557 FORWARD LENGTH=448 |
Transcript Sequence (2120 bp)
>PGSC0003DMT400033082 2120 pgsc_dm_v3.4
TCTCATCCCAACAACAATTACAAAACAGACAATTCTCTTCACAAAAATATCCAATACAAC
AAGAAGAAAGACAGTATACTTCTTCCTCTTCTCTCTCGCGCTGCAAACCCAGCAAACCAT
ACCCGGAAAAAAACCCATCGCGCGTCCTCCTCTTATCTCTACCTTATCCTTCGCATTCTC
GAATTTACAGGTGTGAAAATCGTGTTGATCCTTTGTCCTTTACTCAGAAATCAACGGATG
CCTTGAGTTGAGAATTGATACTATTTGACAGCTTCTCAAACCTTATCTATTGAAAGGAAT
TCGAATTTCGAATTTCAAAATTCTTCCCAGCCTCATCCGTTTCCCCTTTTTCAATTCCCA
TTCCCCCCCTATATATACCCTGTTGTCGAGATAAATTCTTGGGAGGCAGAAAAATTAGAG
GTCTGGAAGAAACGAACTTGATTTGTAAAATTTTCATTCAAAATACACGTTTCTGATAGC
CAAAGAGAGAGTGCGCTGTCTCGAGTCGTTTTGGTTTGTTGCAAAGTTTAGTCATGGTGT
AGCTTAGCTCGTTCTCGTCTCAGTTCAGTTCCGAAGAAGGCTGATGATATCATCCTCAGA
GACTAACTGGTTACATTGTATCATTGATATACCTGTGTCGACGTTAGGTGCAACACCACA
TGAAGAGTCGACACAGAAAATACATTTTGGTATTCCACATAAACTTGCCGAGAGTACTAG
TAAGGAAGATTATCACAAGTACTACGAGCCCCGTGTGGTTTCCCTTGGTCCATTCCACTA
TGGAAAACCTCATGTTGAACCCATGGAGAATTTCAAGCGGAAAGCAGTGAGGGAATTGTT
ACTTGAATCCTTGAACCAGGATTGCTCATCAGACGAGGAGCTGGCATCCCTTGAAAAAGT
GTATAAAAGTGTTGAACATGACTTGCTCAGTGCTCGAGATCTTTATGACATGTCTCGTAG
GGATACAATTTCAGACAGTGAGTGGTGTCAGATGATGTTCCGCGATGCCTGCTTTATTAT
TTACTTCATCACTAGTACTGGCAAGAGGAGCTGGTTGAAGAAACGTAATAGAGATTTGGT
GTGGCGTGACATTATATTGCTTGAAAATCAATTTCCTCTCCAGGTTCTAAGCGCGTTAGT
ACGCGCATTCAAATGTGAAGAGTCTCTTTTCCGGGTTCCAACTCCTCCTATAGTTGATAA
TTATATCTACATCTACAAATTTTCCTTTCTTCATCCACATCGGGCCCCAGATTCTGTACA
TCTTCTTCAATATTATAGAAACTTGTGGATCAATGTTTTATTTAACATTGATGTCGAAGA
AGAAGAAGAAGATGACAACAAAAAAGAAGAAGATGGTCCACCTTTCTCAGTCACAGAGTT
GAAGAAAGTAGGTATTCGTTGCAGCTGTGCGATATCGCAGAATGACAAAGTCATCCATTT
TAAATCATCTATGTTATCGGGGAAGTTATTCCTTCCACAACTAATTATCGACGAATTGAA
TATGACCCTTTTATATAATCTAGTTGCGTATGAATCTTCGTGCAGCTTAGAATATACATC
CTTTGGATTCTCATCTTACTTGAATTTCATGAGTATGTTAATTAATGGAGAGGAAGATGT
TAAGGAGCTGCGAGCCAGGGAAGTAATCCAGATCAACCTCAAATTTAGCGATGAACAAGT
GGTTAACTTCTTTAAAGATATAGTTGCACATCATGATCCCAATCCTCAAGGTTTTAAGGA
TGTCAAACAACAGATTTCTACTTACTTCAAAAGTAAAAATCTTCTCCCTCTACGAGTTGG
TTATGCTGAATTTAAGCAAAGGTACTTTAGTGGTCCATGGAGTTTCCTTGTGTTCCTTGC
TGTTATTTTCACGGTTAGTATGACTGTAATTCAGACCGTCTTCACAGGCATTCAGACATA
CAAAAAAGACTGACTGAGTACCCCTATCAGTATTTCATTCTGCATTTTTCTTGAGCTCTT
GTATCTTCATGAGTTGTATTGTGATTGTGGTTGTATTTGAATAAATCAATAACAAGGCCT
TGTTCGGCTGCATATTTGTATGTAATTGTACTTTTTCATGAATTCGTTGTATTTTGATTG
TGGTTGTATTTGAATAAAAC
