Microarray Probes on PGSC0003DMT400033027
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_43377_PI426222305 |
JHI_St_60k_v1 |
TTTGTGGTACTTTGTATGTATGCCCTATTTTCTGAATTGCATCCCTATGTGATAAGTTCC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400033027
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400033027 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G25780.1 |
+2 |
3e-70 |
223 |
125/202 (62%) |
allene oxide cyclase 3 | chr3:9409362-9410409 FORWARD LENGTH=258 |
Transcript Sequence (1027 bp)
>PGSC0003DMT400033027 1027 pgsc_dm_v3.4
TCAACAACAACCTTATTCAACTTTCTTGTAAGTCTTTTGTTTTACCACTAGAACCAACAA
ATAGTTCATTTCTTCTTCAGCAATGGCCACTGTTTCCTCAGCCTCTGCTGCTCTTAGAGC
CATTTCTTCTTCCTCATACAAGCTACCCTCTGCCTTCCAAACTACTTCTCTTTCTCAAAA
GATCCAATCTTTTAAACTCCCTAACCCTCTCATTTCTCAAACTCATAAACTTACTACTGC
TTCCAGATCATTTTCCTGCAAGAGCCAGAACAGCTCAACAGATTCAACTAACACTGAAGT
TCAAGAACTTAGTGTCTATGAGCTCAATGAACGTGACCGTGGAAGCCCTGCTTATCTTCG
ATTGAGCCAAAAGAATGTCAATTCACTCGGAGATCTTGTCCCCTTTAGCAACAAGCTATA
TACTGCAGACCTAAAGAAGAGAATTGGAATAACAGCAGGACTCTGCATTCTGATCAAGCA
CGAAGAAGAGAAGAAAGGAGATCGCTATGAAGCTGTTTACAGCTTCTACTTCGGCGATTA
CGGTCAAATCGCCGTTCAGGGATCGTACTTAACCTATGAAGACACTTACCTCGCCGTCAC
CGGCGGATCTGGCATATTTGCTGGGGTTTCCGGTCAAGTAAAATTGCATCAACTCATTTT
CCCTTTCAAGCTATTCTACATTTTTTACTTGAAGGGGATCCCCGATCTGCCATCTGAGTT
GTTGTGTACGGCGGTTCCTCCGTCGCCGACGGTAGAGCCAACACCTGAAGCTAAAGCTTG
TGAGGATGGGGCCGCACTGAAAAATTACACTAATTAAGTGGGGGTGTTGATGTGCAAATC
ACAACTTTTGTTGGGGTCGTTCTGAATAATCAATAATTATGAGCTGTAGAATTAAAAAAA
AGTAATATCATTGTCCTTTTATTTTGCAATTTTTGGTATGTTATTTGTTGTTTGTTGGTT
AACCTATTTTGTGGTACTTTGTATGTATGCCCTATTTTCTGAATTGCATCCCTATGTGAT
AAGTTCC
