Microarray Probes on PGSC0003DMT400032780
Probe ID | Chip | Probe Sequence |
---|
CUST_23917_PI426222305 |
JHI_St_60k_v1 |
GTGGTCTGATTTTCTTGACTTAGATGGAAGTTGAGAATTCTCTTTAATTTGCATTCCAGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400032780
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400032780 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G19270.1 |
+3 |
4e-24 |
103 |
54/128 (42%) |
DA1 | chr1:6663327-6665845 FORWARD LENGTH=532 |
Transcript Sequence (1072 bp)
>PGSC0003DMT400032780 1072 pgsc_dm_v3.4
GAAATCTTAATCATTTAGCATTAAAGACTGAATATTTCCTGATTCACAGAGAAAAATCTG
CATAACTAACCACCGTTTCCAGCTATTGTTTTTCCCCAAGGATTGGTTACTCTTCCCATG
AGTCACCTAAATTGAGACATTAAGGAAATATTGAATGGTGACGAGTGGGGGTTGCAGATG
TTGCGTGCTATCCATATTCTACCATTAGTGGTCTGATTTTCTTGACTTAGATGGAAGTTG
AGAATTCTCTTTAATTTGCATTCCAGTTTTAAAAGAATGTGTAACAAGTTCCCCACTTAC
AGTTTATGTATGCATCAATGCTCTCTGTAAACAGGTTGGCCATCGGATCAACTTTGGCTC
ATGAACTGATGCATGCTTGGATGCGCGTTCAAGGCTATAGAGGACTGGCCCTAAACATTG
CAGAAGGTCTTTCTCAGGTTATGGCTCACAAGTGGCTAGAATGGCAATCTTTCACAGGCG
ATGACTACATGAAGGGTACAAGTGAAAAAGCTCAGTTCTTGAGAAATTTGAAAGAATTTA
TGAAAGATGGAATAGAGAGAAGATATTCTGAGGCATATGGTCATGGATTTAGAGAAGCAA
AATGGGCAGTTGAACGTTATGGTTTAATATACACACTCAAGCATATAGCTCGTAAGGGCA
AGTTACCTGAATGACTTAATTCAGCAAAATGGGCAGTTGAACGTTATGGTTTAAGGTTCA
CACTCAAAAGCATATAAGCTCGTAAGGGCAAATTACCTGAATGACTATCGAACCCTCACC
AACAAGGTGAGAGTTCAGGTAGTCAACCAATTAAGCTACTAAGATTCTCCTAAATGACTT
ACTTCTCCGGGTGACATTATTAATTTTTGTGTTAATTCATTCATCATTGGGATGAAATTG
ATGGTTCTTGGACAAACATTTCTGTGAAAAACTTGTAATTTTTTGTAATTTACTTTTGTG
ACTCCAAATTGAGGCCCTGAAATTACATGGGTAACACAAATAGTACATAGGGATAGTGAC
TTATTTTTCTTACAACTTTCTTGACTTTTAATATCACATTACTTGCTCGAAT