Microarray Probes on PGSC0003DMT400032715
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23981_PI426222305 |
JHI_St_60k_v1 |
GCTCGTGACCTGTTCCCGTCTTTGTTTTCCCTTTATTCCCCCTTAAAGCTAATTCATAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400032715
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400032715 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G64170.2 |
+1 |
7e-71 |
249 |
211/669 (32%) |
dentin sialophosphoprotein-related | chr5:25672904-25675934 REVERSE LENGTH=616 |
Transcript Sequence (3024 bp)
>PGSC0003DMT400032715 3024 pgsc_dm_v3.4
ATTTTTTCAAAGCTGTTTGTTCTCTTTCTCTCTCTATCCAGAAACTCCGAGATTTGTCTT
TCCGAGCATCAAATTAGGGTTCTACTGCTGTCCTTGTGCCGTTCAAGTATCGATTTTCTG
GCCAAGTTCTAGGTTTTGCCGGCGCTTATCGGTTTTGAGGTGAGTTTTCCGGCAGGATCT
TTTGTGAAGTGATATTTGCTTGGTTAATTTGTGCTCTTCTTTATCAACTTCTTACTGGTT
GAACTTCAGCGATAAGAGTTTTCAGCATCTGAACTGATTGAATATTTTTCTTAAGTCAAT
TTACTACATCAAGTTGTAATCTATAGAAAATCTTTCTGCTTTCTTATTACTTACTCATGG
ATGTTCAGATTTTGAAGCTTTGAGAAATTTGCGCGAAATCATTTTTGTTATCTCAGCGAT
TGTGTATTTAGGATGCTTAAAAAAGTAGGAGCAGGAGAATGATTTTCTTCAATTGCTTCT
AATACTTTATTTTCCACATTTCTTGATATGTCTGGTTGGTGAATGGAGATAAAGGAGGAT
TTGGGATTTGAATATGAAATCTGATCAGTGTGTTGCATGTGGCTTGAGTGCTGGTTAAAC
AACTCAAAAGGAATGTCAGATTTGCAGTTATACGGGCTTGACGATATATCTTGGGATGAG
TTCTGCCACAATGATGATCATATAGTGCCACATCCAAGTAGCGGACGCACCAATGAACCA
CTCTCCCAGAATGATAGCCGTAAGAAGCCTCGCCATGAAGTAATTGGTTTAACAGGTAAT
GCAGGTGATCAATCTACTGGTAAATATGCTAATCAGCAAAAGGAGCAAGTGTTGAGTAAT
AGAAGCCCCAAAATGCTGGAAAAGGACTCGTGGGCTGATGCACCTGATGGTGCATTCTCT
TCTCCACGTGAAAAAGCCATAGTCGGAGAAGTTTCAAGTTTACCATCTGAAAATACCAGG
ACATCCAATCGTTGCATCAAAAGTAATAATATAGACTCCATTGAGAACGAGTCCTGTCCT
AATGGTCGCACTCTTGATGACAAGAATGCTGCTGTGGGGGAAAACTCTTATAGCTATCCA
CTTGGTCCCATATCTCAGGCTGATGATGATCTCAGTTTTCTTGACAATAGTTGTGATGAT
AAAGACTCTAATGATCTCTTATATTATAGCTGGCCTGAGATAGAGAACTTTGAGGATGTT
GACAGGATGTTCAGGAGTTGTGATTCGACATTTGGATTTGGACCTGGTAGTGAAGATGAC
CTAGGTTGGCTTTCATCATCAGATGTTATTGAAGGATCTGGAGATGGATTGACGTCTGGT
TTTAAGTTTCCATGTCCAGCATCCAATGCACTTGGAAGTACATCCGCCAGTCATGAAACT
TCAAAGCCAAAGGAAACAAACATTTCAACTGATAATTCTGGCATTGAGAATCAATCACTT
GGCTATAATAGCAGTTCGTGGTCCTCCGAGAAAAATGAATCTGTAAATCTGAGTCATTTG
TCTTTTTTAAATGGATCAAGTAATTTACAGTGCAAGTTAGCACCTGATAAGAAGGCTGAG
GTACATGGTGGTGGAGTCCAGGTTGAGATTGTATCTAATAACCAACCAAGAATCAACAAT
AATGTAGTGGATAGCATGCAAAAGAAACACTCCAAGCACCAGAATCTCTCCAAGGGTAAA
ATAAAATGCGGTTATCTAGAAAATGGAGACGCACTCAATTACACTGATAGCCATCCAGAG
GAGCAGAAGCTGCCTTCTGGGATCGCAAGCACTCAAGTGAATTTCACATCTGCAGGTGTC
CTGCAGCAAAAGCAAGCTCAAGATCCTGATTTTGGCTACTTGGGTGGTAGCTTCTCTTAC
ATGCATTCAGATTACGGTCATTCCAATGGGAGTGCTCTCCATCCAACTCTACCAATTTTA
AAATATGAAAGTAACGGTCTCGTGTCTCTTTCCCCCAAGGACTCTTATGCATCAAATCAG
GTACAGTCCATGGAGGGTTCTCCTGATCCTTCTTTTCAGGTGGCTGCTATGACAAGAAAT
GAGAAGGTGGAGAAGTTATTCCATAGATCTGGAGTTAAGGTTGAAAATAACCGTGATTTT
GAAGGGGTTGGCATAAGAATTCCCACAGAATTAGGATCCTCAGTTGTACAGGAGTGTTCT
TCTACAAATTCTGGGTTGGATGAAATTTCAGAAGAAGCAGCTAGTTTTCATCAGCTTCAA
CGTGTCATGGAACAGTTGGATATACAGACAAAGCTATGTATAAGGGATAGCTTGTACCGG
TTGGCTCGGAGTGCTGAACAAAGGCATAGACATGCTAATCTCAATATTGTCTCTGGAGAT
GATGGAGGTACCAGCGAACCACTGGTTACCGAAGGAACAAACAAGTGCACAGGATATGTA
GACATCGAAACAGACACAAATCCCATAGACCGATCTATTGCTCATTTGCTATTCCACAGG
CCTTCAGATTCAGCTGTTACCCCTGCCCGCGATTCCTCAACTTTGAAGTCGCCTTCCATG
ATTCATGGGTCATTGTCTAGCGCACCAGTGATGAGTGACAACTTGATCTCTCATGGAGAA
ATTGCATTTCAAACAGATGGAGAAGCTGCTGATCATTGACCATAACTATTTAAGAAGTCA
ATTTCAGTTTGTGGGGGGATTTCACATGCAGAAATTATCAAGCTATCATACAAGGAACCT
TTATGTTTTGAATGTTTTCTCAGTGACTGGTTTCTGGTCCATGTGAGAACATATCCTTGT
ATGAGCTTTCGCAATCAAGTTATTTTTATTTCACTCTAACCCTTCCTCACTCGGAAGGCA
TACACAAACTACCTTTCCTGTGTATACGTAGATCAAACCAACTGACTCTTTTTTGTTGTT
TGTAAGTAGATAATACCTGGAAATTTTCCAGAAGATACTTGCAAGTCTTGAAGTAGCTCG
TGACCTGTTCCCGTCTTTGTTTTCCCTTTATTCCCCCTTAAAGCTAATTCATAATTTAAT
TTACCCTACACAATCTAACCCAAT
