Microarray Probes on PGSC0003DMT400032705
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23958_PI426222305 |
JHI_St_60k_v1 |
TTGTGAGCTATAACTTCACAAATACCTTCTGCGATGTTTAGGGACAGCCCCTCATACCCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400032705
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400032705 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G64210.1 |
+3 |
5e-144 |
426 |
216/282 (77%) |
alternative oxidase 2 | chr5:25683965-25685664 REVERSE LENGTH=353 |
Transcript Sequence (1924 bp)
>PGSC0003DMT400032705 1924 pgsc_dm_v3.4
CGCCACGTAAAGGTCCACGTTCGCTTTTGCATACAGATTTGTACTTGTCTGACAATTTTA
ACCTCCCAGTTGAAGTCTAACGGACACCTTTACCATGCTCTGCTCTAGGAGTGTCTCCGA
GTTAACCGCTTCTTTTATCACTAAACAAATAATCACTCTTCCAGTTTCCGTGTATCACAG
CTTTGATTATCGGAAAGATGAGTCAGTTGCTGGTGAGGTCGGTTATGAGGCGGTTAGTTT
CTGGCGGTACCTGTAACCGTTGCATATCGTCTGTGTCTGCGGCGGCGGCGGTAGTGTTCA
GAGAAGTTCATAAGCCGAGTAGTGAGTCAGTTGTGATGATGAGTAGCCAGAGGCTGAGAT
TCTCTGGTCAGTGGTGGAGGATGATGTGCTTCACTAGTGAACCACCATCGAAGAATTCAA
CGACGTCCTCTGCGGTGAGGAAGGAGGACGAGAAATTGAGTGGTGATTCTGTGGAGAAAA
TGGAAGGGGAAGACAAAGTAGCTCTTTCCAGCTATTGGGGAGTCTCCAGGCCAAAAATTA
CGAAAGAAGATGGCTCCGTGTGGCCTTGGAACTGCTTCATGCCATGGGAGACATATCAGG
CTGACTTGTCGATCGATCTAAGCAAGCACCATGTGCCCAAGACATTCCTTGATAAGGTTG
CTTATTGGACGGTGAAACTTCTCAGGATTCCAACTGATTTATTTTTTAAGAAAAAATATG
GTTGTCGTGCAATGATGTTGGAAACAGTGGCAGGTGTACCTGGAATGGTGGGAGGTATGC
TGTTACATCTGAGGTCATTGCGCAAGTTCGAGCAAAGTGGTGGTTGGATAAAAGCATTAC
TTGAAGAAGCTGAGAATGAGAGAATGCATCTGATGACTATGGTGGAGCTAGTACAACCTA
AATGGTACGAGAGGTTGTTAGTTATTGCTGTGCAGGGAGTCTTTTTCAATTTTTACTTTG
TGCTTTACTTGCTGTCCCCCAAGCTTGCACACAGAGTTGTCGGTTATCTGGAAGAGGAGG
CTATACACTCTTATACGTTGTATCTTAATGATATTGATCGTGGTGAAATTGAAAATGTTC
CTGCTCCTGCAATAGCAATTGACTACTGGAGGCTGCCTAAGGATGCAACTCTAAAGGATG
TTATTACTGTCATCCGTGCTGATGAAGCTCATCATAGAGATGTTAACCATTTCGCATCTG
ATATCCATTATCAAGGAAAGAAATTGCAGGAGGCAGCTGCTCCTATTGGTTACCATTAAA
TCTTCATATTGGTCTGCTTTGCATAGTTTTATATATATATATATATATATTGTAGACCAT
GGTCCAATCAAAACAAGTAGGGTCTCAGTGGGGCATTTCTAATTAGTCATGAAATCCCCA
AATAGTAGCATAAGTATGGATTAAACTACTGTTCTATCCTCTGCATAGTTGTATTTATGA
TAAATGCTTTTGCTCTTCAAATTTTGTAATCTTAATAGGAATGCAAATGATTCCTAATCC
AAAAAAAATTATTTATTGGATTTCTTTTATGACACGCATGCTGGGAAACCTATATCTCCA
GAAATTCACAGAGAAATGGAAGGATCTCCAAAATTCTACGAATGGCACGTTAAGTTCTTC
TAAAGCAGAAAGGCAATTAAATCACTCAGGTAACTTGCCTGTACGAGATATATGGTCCAG
TGTGCATCTTAAACCATAACGTTCAACTGCCCATTTTGCTTCTCTAAATCCATGACCATA
TGCCTCGGAATGGTTTTTTTCAATTCCGTCTTTCAGAAACTCTTTCAGATTTCTCAAGAA
CTGAGCTTTTTCACTTGTACCTTTTATGTTTTCATCACCAGTAAAAGATTGCCATTCTAA
CCACTTGTGAGCTATAACTTCACAAATACCTTCTGCGATGTTTAGGGACAGCCCCTCATA
CCCT
