Microarray Probes on PGSC0003DMT400032415
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18126_PI426222305 |
JHI_St_60k_v1 |
TTGACTATATTTGTTGCTGTTTCACTGCTTGTGGAGCGATCCATTCACAGGTTATCTAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400032415
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400032415 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G53760.1 |
+1 |
1e-83 |
288 |
172/254 (68%) |
Seven transmembrane MLO family protein | chr5:21823055-21826289 FORWARD LENGTH=573 |
Transcript Sequence (4851 bp)
>PGSC0003DMT400032415 4851 pgsc_dm_v3.4
ACACTGCTTTTCAAATTTTTTACTACTATTTAGTTCAAATGATCACACTTTTTTTGTCTT
TTTATTTGGTTCTTTTCTGCAGTGAGTAGTGTTCTTTCTTTAATTAACATTTTCCTAAAA
GACACTCTTTACTCAGACAAAATCAGCTATTTTAAGCTCAAAACCCCCATAAAGATTGGA
CCTTTCTGCAATTAGTGTAAAGAATAGTTGTTTTTAGTTTCAAGAATCATTTTATTACCT
CAAATTATTTGGTGGGTCTTAGGTCTAGACATCAAATCAAATCTGTAGTAGTTGCATTGG
CAAATCAAGAATTGTGGGTCAAATTAGCTTTTTTTTTGCTGGCTGGTTTGAGTCCAAATC
AGAGTCAATACATCTTTTTGAAAGTTGAGTCTTTGTTGGAATAGCTAAGGAAACATACCC
AAGTGGCAGATTTCACTATTTTTGAATGTGGAGGATTATAAAAGATCCACAGTAGAGGGA
CAATGATTCTTGATTTATTGTACTATGGGAAATGCAAGAAAGGCTGGGTTTTTATGTTGC
TAGTAGAACTTATCAGTCAAGTGAACTGACAGAAAGTTTTGAATTTTTTCTGTAATTAGT
AGAGTTTGATTTGATTTGAAGTTAATAAATTTGAAGTTCTGGTAGATTAGTTAGAAAGAC
TTTTGGCTAAAATGTCTGGAGAAGATACACAAGAACTTCGTTCGTTGGCCTTGACACCAA
CATGGTCTGTTGCTTCTGTATTGACTATATTTGTTGCTGTTTCACTGCTTGTGGAGCGAT
CCATTCACAGGTTATCTAATTGGTTGAGGAAAACCAATAGAAAGCCATTGTTAGCTGCTG
TGGAGAAAATGAAAGAAGAGTTGATGCTTCTTGGATTCATTTCTCTCCTTCTCACAGCAA
CTTCCAGCATCATATCTAATATTTGCATACCGTCAAAGTTTTACAATAATGCATTTGCTC
CATGTACAAAGTCTGAAGTTGATGAAGAAATGGAGAATAAAGATTTGAAGGAGCGTAAAC
TTTTGATGGCTTTTGGTCTTCATAGGAGAGTATTAAATTCCTTCAATCAAAATACGTGTG
GAGAGAACCATGAACCTTTTGTATCATATGAAGGCCTTGAGCAGCTGCATCGCTTCATCT
TCGTCATGGCCATTACTCATATATCTTATAGTTGCTTGACAATGCTGCTGGCGATTGTTA
AGGTAAAGTTCTCTTTTACTTGAGAATTTGATAAACGTTGTTTTGGTGAACTTTTGAAGT
CCAGTTATTTTCGAGTGTATGCTAATCTATTGTCCATGGAGTGGCAAGTTTGATTGGATG
GAAGTAAATTGTGATGTATTAATCTGGCTTGCAAAGTCTACTGTCATATATGATGGTAAT
GCTATACATCCTCATTCAATGGCCCTATTACTTATTACCTTGTGGACAACAGATTTGGAG
TGAAGATTTGTTTTCTGGGTGAGCTTCCTGATATGCTTAATGTATAGACTGCTGGAGAGG
CATAGTGTGTGATAGCCGGAGGTATCTGATTTGTTGCTGAAGTTCTGATAAAAGTATTTT
GATGCCCACAGTGTTGGGGGAATTAATCTCTTTGTCAACAATTTTTTGCTTCTACTTCGG
CATTTAAGCATATCCTCTCTAGCAGGGGCATTTGCTCTGCTGTCTGCTCTCCTTGAACTT
ACATTAGGTGAATAGGCAACTGTCTATATTGAAATCAGGGAATCACGCCATACTGCGTAT
AAAGATGGTAGTCCAAAGTTCAATTTCTTCACACTTCATAGTTGTGTCAGTGTCAGCTAC
TTGCCACTTCCTTGCAGAAGTTGCCATGTTTGTCCTACGAAATGACCACGTCTGGTTTTT
ATCCTCATTATCACCACTTCTCTCTTCTTCTTTACTTCTGTAAACTCTATTCACATGTTC
TGCATCGCTAGCTGCCTGATAAGTGAAAATCTGGATAGGTCCACAGTTGGAGGGTGTGGG
AAGATCAAGCGCAGAATGACAGGCATGATGTACTAACTGACATTTCTAGAGCCAAGACAT
TCCGAAGGCAGTCGACTTTTGTCAGAGTTCATACATCAAGTCCACTTGCCAGGAACCATT
TCCTTGTTTGGGTGACCTGTTTCTTCCGGCAGTTTGGCCGCACAGTTGTTCGTGCTGATT
ACCTTACTCTGCGCAAGGGTTTTATCATGAATCACAACCTTACATCAAACTATGATTTTC
ACAGCTATATGATTCGCTCGATGGAAGAAGAATTCCAAAGAATAGTTGGTGTAAGTGGCC
CTCTCTGGGGATTCGTGGTGGGTTTTATGCTGTTTAATGTAAAAGGTACTTCATCCTCCT
CTGTTTGGAATGAGGAACGTATGCCACTTTTGTTTTTTATCATTAGATAAGTTTGCATTT
TTCTGCTCCCCGACATTTGTGTTCTGGTGAAACTAAACTTCATCCACAAGCTCATGCATG
ACGGCATGACCATTGACCAATTGAACTTCAACATGCAGGATCGAATCTGTATTTCTGGAT
AGCGTTAATTCCTATCATTGTAAGTGCTTCCATTGCAATTATGTTTTGGAACTCTTCAGA
AATGCATGAACATATATGCTTGCGTATATAAAGCAATGCCTCTTTCCGTTTCTCTTTATT
CCTTACGGTGTAGTGGTAGACTTGACTGTGACCCTGCATGCGTCATCTTTCTTAATATTT
ATCTCTTCCCTTACATTCTGAATTATCTTGTATATTATATGAACTTATGGATGTGATAGA
AGATATAAATAGTCATTTACTTGTACTTCTGTGCAGCTTGTACTACTCGTGGGTACAAAA
CTGCAGCATGTAATCGCAACCTTGGCATTGGAGAGTGCTGCAATTACTGGCTCATTCTCA
AGGGCCAAGCTAAAACCACGAGACGAACTTTTTTGGTTCAAAAAACCAGAATTACTTTTG
TCCTTGATTCATTTTGTCCTTTTCCAGAATGCATTTGAGCTAGCTTCATTTTTTTGGTTC
TGGTGGCAATTTGGGTATAACTCATGCTTCATAAAGAACCACACACTTGTGTATCTACGA
CTCGTTATGGGGTTTGTTGGACAATTCCTTTGCAGTTATAGCACCTTGCCACTCTATGCC
CTGGTTACACAGATGGGTACAAACTATAAGGCTGCATTGATTCCACAGAGAATAAGAGAA
ACGATCCACGGATGGGGAAAGGCAGCAAGAAGAAAAAGGAGAATGCGTATGTTCCCAGAT
GATTCAACTGTGCACACTGATACAAGCACCGTGATGTCCCTCGAGGAATATGATCATGAC
CAGTTGGTTGATAGCCCTCGAACAGTGCATGGTGCAGGTACAGAAATCGAGTTACAGCCA
CCAACAACTGTCACGGAGGATCATCATTCAGTAACAATTAACGACACTTCAAGTCGTATT
GGTACTCCTCTCCTTCGACCCTGTGCCTCTATTTCTTCCGCAACTTCCCCAAATCTTCCA
CCTGAAGTAATATCAAGATCATCTTCAATGCCTGCTAGAGGACATTTGAGTTTGGGTAAA
CAATTACCATTATAGTGAAGTCGCAAAACAACACGAAGTGAAGTTGGTGTTGATACTTCT
GCAGGTTTGTTTAACGTTGCATATAACATATATACTTGAAGATGTTTGACATGTGAAATC
AAAGAAATATGCAGGTAGGAAAGAAATAGTTTCTATAGTTGCAAAAATATTTTCCCCCAA
AACGCTCTGGATTGAAAAATCTGTAATGGCTGTTTCTATGTAGTATCCCTTGTATAATCA
GTTACACACATGAGCTATCTAGGTAAGATAGAGCATCTTAAAGCTTGTATGTTTTCCTTC
GTCAAATAGTTAAAGAGTTTAACTTTGTATACATCGACAATTTGGAGGATTATACACCAT
CATGTTGCAACAGATAACTTGTCTTACTTTTCAGACTAGTAATTCCATTTTTTGAACGAT
TACATGTAGTTATCATTTTGATGATTGATCGTATAGATAACTCTTGTTCAGCAATGTCTT
TTCGTTTATGAGGATCGCGAGTACTTATTACAACAGAATAGTTTCCAGCCAAATGATAAG
AAAAGACGTCTAATGGAAATGTATTAGCATTATAAGTCCCATAGTATTCAACTTTTCTCA
CTGGCATCTATACTTGATCCTGCATCCGCCAGTGCTTCAGCCATCATTTTTGCTCTATTC
TGAGTTTGTCTTTCCACAGCAACCATATAGAAGCCTAACAAGCAAGATACAGATAAAGAA
CAACATCAAGTATTCAAACAGAAGAGCTAAAAATAATTTAAGCACTCAGCAGAGATTGGT
CACAGTAAACACAAACACACAGATATATCCAAAATCTTGATGTATCATTACACTATACAT
AAATTTTCGTTTGTCAAGAGAGTCATTGTGCATACTGAGAATGGAAGTAGATCATCTCAA
CAATCCATACCCCATAATGTCCCATGGCACCCCTCAAAGCTTTCTGGAACTAAAAGAACC
TAAAAATTGGCATGTGAATCAAAATCTACAGTATATGAGTAATGATATGAATTATGATCA
AACTTTGATGATCACTATAAAGGTGAAGAGTTGATCCATTTGCCTAGCGGGGTTGTGGTT
CAGCGTTTATCGTACTTTTCAGTTAATCAATTATAGTCTGCACAAAGATAGTTGAGAATC
AGTTATTCCAAACGTAAGAAATTTTTAAAACAAAATTATAACATACTGCATTGAGGAACA
AGTTATCACTTAACTTGGAAGATTTCTATGTTTGAACTGGTGGAGATGTAGAGTTTCTTC
TAGCCAATAACTTTTTTGAAGCTCATAGGATTATTTTTCTATAAGCTCTTT
