Microarray Probes on PGSC0003DMT400031261
Probe ID | Chip | Probe Sequence |
---|
CUST_6983_PI426222305 |
JHI_St_60k_v1 |
TATGCATTGCATTGCTCATCAACAACTGGTAATGTGATGCATAGCTTCTCATGGGGTGGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031261
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031261 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G67710.1 |
+3 |
5e-124 |
380 |
267/583 (46%) |
response regulator 11 | chr1:25376994-25378905 REVERSE LENGTH=521 |
Transcript Sequence (1887 bp)
>PGSC0003DMT400031261 1887 pgsc_dm_v3.4
GATCTACTCCTGTCTTCCCCAAGAATCTGGCTGTTTTTATGATGGAGAATAGTAAAACCA
GTGCTGGGTTTTCTTCCCCAAGAACTGATACTTTTCCAGCTGGTTTAAGGGTTCTTGTTG
TTGATGATGATCCTACTTGGTTGAAGATTCTTGAAAAAATGCTTAAGAAGTGTTCTTATC
AAGTGACAACATGTGGTCTAGCACGAGAGGCTTTGCATGTGCTCCGAGAGAGAAAGGATG
GATTTGACATTGTGATCAGTGATGTTAACATGCCTGACATGGATGGATTTAAGCTTTTGG
AGCATGTTGGACTTGAGATGGATCTTCCTGTCATTATGATGTCTGTGGATGGTGAAACAA
GCAGGGTGATGAAGGGTGTTCAACATCGTGCATGCGATTATCTTTTAAAGCCTATACGGA
TGAAAGAACTTAGAAACATATGGCAGCATGTACTCAGAAAAAAGATGCAGGAGGCAAGGG
ATGCTGGAAATCATGAATTGGACCAATATGATGAAGTGTGGATGCTTAATGGAGCTGAAA
TCCTTTCAGGAAAGAAAAGAAAAGATTTTGAGAATAAGCATGATGAAATAGAAATGTCCG
ATTCAAGATTTGTTGATTCTTCTTCCATGAAGAAAGCCAGAGTCGTTTGGACTGTAGATC
TTCATCAGAAATTTGTCAAAGCTGTAAACCATATTGGATTTGACAAAGTTGGTCCCAAGA
AGATTCTTGATTTGATGGGTGTCCCATGGTTGACTAGAGAAAATGTTGCTAGCCACTTAC
AGAAGTATCGCCTCTACTTGACTAGGTTGCAGAAAGAAGATGAAGCTAAAGACTCATTTG
GTGGGATGAAGCATCCGGATGTTTCTTCTCAAGAAATTTGTTCGAGTCTCAGCCTTCAGA
ATCCAGTGGATGTGTACACTGATGTTACAAATGACAAGTATGTTTGTGTTTCTGGAGACA
AAGCTATTGTTCAAAATGGGAAATCCAACATATATGAGAGCAAGGTAAAGGGTGTTGTTT
CAGTGCCAGCTGCTGAGGCAAAGTCTGTGATTGAAGATAACTTTGATTCTCAGACTGCTG
GTTCAAAGATAGGCCTCAAGGATTCCTTTGGATTGGTCAATACTGATGTAAAAAGTTCTA
AGGTACCCACTCCATACTGCTCTACTGGAGAAGCTCCACAACCTCAATACAAGCAGCAAG
ACTTTAAACCACATTTTCAGTCAGCTAATGGGTTAAGTCACCAGCCACTGCCTGTGGTTT
CTCATCAAATCCCAGTTGATCGCACACAAGTGACTTGTTTTGTCAACCATATACCTTCTC
ATGAAGAAAGGGACAGACATCCAGATACAAGAAATAAACCTTCTTTCTTCAAGACCAAAA
ATGGAGTAGGAAAGTTTTCTCCAGTAGAAAGTAATGTTAACTTGTTTCAACCTGTGAGCC
ATCAACAAACAAATTTTCATACTCTTGAGCAAATGCCAAGTACTACATGGAGAGCGACGA
GTCACAATGTAGTCAATGGTTCACAATCAAGCCTGGGAAATCTAACTTTGAGAAGTGGTT
CAATTGTTGCATCTGTAGGTGAGGAGATTTTTGGTGCTTCTGTTCAAGGGGAATGTTTTC
TAGCTAATAATGGTCTTCCGAACATTGAACAATTTGACTACAATGATCCACAACCCATTT
CTGGAGTTCCAACATACTTGTATGATACATTGAGGTTTGATTATGAGTATCCAATTGATT
CATTGGAAGGTAATATGATGGACCAAGGTCTGTTCATAGTCTAACCTTTATCCCATGGGA
AGCTTTAGATGGTAGACAATATATGCATTGCATTGCTCATCAACAACTGGTAATGTGATG
CATAGCTTCTCATGGGGTGGGGTGGGG