Microarray Probes on PGSC0003DMT400031199
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_51087_PI426222305 |
JHI_St_60k_v1 |
CTTGTAATGAACATTGGTGGTTGCTTGTGTTACAACCCAATCTTCATATAGTAATACATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031199
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031199 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G38540.1 |
+3 |
1e-23 |
94 |
57/113 (50%) |
lipid transfer protein 1 | chr2:16130418-16130893 FORWARD LENGTH=118 |
Transcript Sequence (682 bp)
>PGSC0003DMT400031199 682 pgsc_dm_v3.4
TAGCTTTTGCACACAACACTCAAAACAAATACATTTGTAGTACTATATCATCCTCTACTA
TTTCTATCGATCTTTACTCAATTTTTGTAACAATGGAAATGTTTGGCAAAATTGCATGCT
TTGTGCTTTTGTGCATGGTGGTGGTTGCACCCCATGCAGAGGCACTGAGCTGCGGCGAGG
TTACATCTGGCTTGGCTCCTTGCCTCCCTTATCTTCAAGGAAGCGGTCCTATCGGAGGGT
GTTGTGGTGGTGTTAAGGGTCTTTTGGGTGCAGCCAAGACCCCAGAAGACCGGAAAACAG
CATGCACTTGCCTTAAGTCGGCAGCTAATTCTATTAAGGGAATTGATACGGGAAAAGCCG
CTGGTCTCCCTGGAGTTTGTGGAGTCAGCATTCCTTACAAGATCAGCCCTTCCACTGATT
GCTCCAAGGTCCAGTAAGGTTGATGAAATTAAAGATAAGTCTATATATAGCTTGCAGAGA
TGAAGAATAAGATGGATATATATCGATCGAGTTTGATCCATCATTATATATGTTGTCTCT
TTTCTTTTGTATTTGTGTCTGTTGGAGTACTTATATATTGTAGTCTTGTAATGAACATTG
GTGGTTGCTTGTGTTACAACCCAATCTTCATATAGTAATACATGATATTTTCTTCTTTAA
ACTTTTCTTAACTATTAATTAT
