Microarray Probes on PGSC0003DMT400031150
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_31873_PI426222305 |
JHI_St_60k_v1 |
GATTGAGATGTTCCCTGCTTGGTCAACATAATTTATGTGTTGGTGTACTTAAATATGTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031150
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031150 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G05600.1 |
+2 |
4e-31 |
117 |
55/76 (72%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr5:1672266-1674602 FORWARD LENGTH=371 |
Transcript Sequence (589 bp)
>PGSC0003DMT400031150 589 pgsc_dm_v3.4
ATCTCAGCTATTGAATATTTCATATGATTGAGATGTTCCCTGCTTGGTCAACATAATTTA
TGTGTTGGTGTACTTAAATATGTAGATATTAAGTAATGCGATATACAAGAGCGTTGAGCA
TCGAGTGATGGTAAATTCCGCAGAAGAACGCATCTCCCTAGCGTTTTTCTACAATCCAAA
AAGTGATTTGATGATAGAACCAGTAAAGGAGCTGCTCACCACACACAATGTTTCTCCATT
GTATCCACCAAGGACTTTTGATCACTATAGACTCTACATAAGGACTAAAGGGCCTCAGGG
AAAATCACAGTTAGGGGAATCAAATAAATTAAATCCCCAACATGACAAAATGTAATTGAT
GTCTTTTTTTTTTGTAATAATAATAATAATAGTGTCATACTAGCTTGTATGGATTTCAAT
TATTGTCCACTAAAGTTTAGCTAGGCAGATGAAAATAAATCCCCCAATTTTTTTTAATAA
ATGATTGGCTACAAAGGGATTTTTTTTTAGTGAACGTGTCACAAGCTTACTCCTATTTTT
TTTTTGTAAAGTTTTTGTAAAAACGAAGCAAAGCCTCTTCAATAAAGAC
