Microarray Probes on PGSC0003DMT400030744
Probe ID | Chip | Probe Sequence |
---|
CUST_47522_PI426222305 |
JHI_St_60k_v1 |
GTATGCACCATTGGACAAAGCATTTGGAGCAAATGTGGAAACATTTTGCATCTTTATATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400030744
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400030744 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G14520.1 |
+2 |
8e-66 |
164 |
96/255 (38%) |
Terpenoid cyclases/Protein prenyltransferases superfamily protein | chr3:4875868-4878243 REVERSE LENGTH=605 |
Transcript Sequence (1519 bp)
>PGSC0003DMT400030744 1519 pgsc_dm_v3.4
ATTATTAAGTTTGTACGAAGCAGCACAAATGAGAGTGCGCGGGGAGGATATTCTCGAAGA
AGCTCTTACTTTTACCACTACTCATCTCGAGTCCATGATCCCCATGTTGAGCAATAATCC
ACTTAAGGTTCAAATTATTGAAGCCTTAAACCACCCTATACACAAAGTTATGCCAAGGTT
GGGAGCAAGAAAATACATAGACATTTATGAAAACATGGAATCACACAACCATTTGCTTTT
AAAATTTTCCAAATTGGACTTTAACATGTTGCAAAAGCAACATCAAAGAGAGCTTAGCGA
GCTTACAAGCTGGTGGAAAGATCTGGATCTTGCAAGCAAAGTGCCATATGCAAGAGACAA
ATTAATTGAGGGTTACACATGGACATTGGGATTGTATTTCGAGCCTCGGTATAGTCGTGC
AAGAAGAATGTTAGTAAAAGTATTCAAAATGCTCTCAATATGTGATGACACTTATGATGC
ATATGCAACTTTTGATGAACTTGTGCTTTTCACCAATGCAATACAGAGGTAATTGATGAG
TAGGAGAAATTAAACATTTTAATGACATACAATAATAGTTGATACAAATTTTTTGATGCA
TAGATGGGACATAAACGCCATGGATTCATTACCGCCATATATGAGACCTTTTTATCAAGC
CATTCTGGATATCTTCGATGAAATGGAGGAAGAATTGACCAAAGAAGGTAAATCAGACCG
CGTTTACTATGGTAAATTTGAGGTAATCCTCGCTTTCTTTGCCTCATTAATCGATTAAAC
TTGTAAATTCTAGAGAAATAACAAAAATATTGGCATGAAAAATGCATACTTATGGTATGT
CGTGCTATTTTTGTGTTTTCGTTTTAGATGAAAAAGTTGGCTAGGGCCTATTTTAAAGAA
GCGCAATGGTTAAATGCTGGCTATATTCCAAATTGTGACGAGTATATAAAAAATGCAGTT
GTAAGCACTACCTTTATGGCGCTTGGAACAGCTTCTTTGATTGGTATGGAGGAATTCATG
ATAACAAAAGACATTTTTGAATGGATAAAAAATGAGCCTTCGATTCTTCGAGCTTCATCA
ACTATCTGCAGATTAATGGACGATATTAGTGATCATGAAACTGACCAACAAAGAGGACAT
GTAGCTTCTGTCATTGAATGCTATATGAACGAATATGGAGCTTCAAAGCAAGAGGCCTAT
GTTAAGTTTCGGAAGGAAGTCAAGAATGCATGGAAAGACATAAACAAGGCATTACTACGC
CCTATTGAAGTACCAATATTTGTTCTCGAACGAATTTTAAATCTTGCACGGACAATGGAT
ACTTTTTTCCAAGATGAAGAAGATGGATATACAAATTCCAATTCCAAATGTAAAGACATT
ATTACCTTGTTGCTTGTTGATTCTGTTACTATATGACGATCATAATGTGTATGCACCATT
GGACAAAGCATTTGGAGCAAATGTGGAAACATTTTGCATCTTTATATTTATAATTAATTG
GTTTATGTTTGCTTTCAGA