Microarray Probes on PGSC0003DMT400030741
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47535_PI426222305 |
JHI_St_60k_v1 |
GTATGCACCATTGGACAAAGCATTTGGAGCAAATGTGGAAACATTTTGCATCTTTATATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400030741
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400030741 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G23960.1 |
+2 |
6e-126 |
388 |
212/545 (39%) |
terpene synthase 21 | chr5:8092969-8095128 FORWARD LENGTH=547 |
Transcript Sequence (2021 bp)
>PGSC0003DMT400030741 2021 pgsc_dm_v3.4
TTATAATGCAAAATCTGATACCTGCATAACAACTTACCTCCAAACCAACTACCGAACGTC
CGTCCTTCAGCATAACAACCTAGAGAAAATGAACTAGAGAGCCCCTTTTTGGAGGTGTGT
GTCTATCTATATATGTTTGTGTGAGAGACTGGGTATGAGTGGAACGATGGCCGCATTTTC
AATGTATCCTCACAGCTTGATAAACTTTAATATTTGGAGATACACTTGTGAACCCAAAGT
ACACTCTTTAAAGAGAAAATTAATGATCCCATTATTAGCAATGGATGCTAATTCTTCACG
TCATTTGGCTAATTTTCATTCAAATGTTTGGGGATACAATTTCCTTTCTTACACTTCTCA
ACTCACCGAAATTACTACTCAAGAAAAACTTGAAGTTGATGAGTACAAAGAAAAAGTCAT
GAACATGTTGATGGAAATTCATGACAATAGTACACAAAAACTTGTGTTGATAGACACAAT
CCAACGATTGGGAGTATCATATCATTTCCATAATGAAATCGAAACATCCATTCAGAACAT
TTTTGATGCATCGTCCCAACATAGTGAGAATAATGACAACCTTCACGTTGTTTCTCTTCG
TATTCGACTTGTGAGACAACAAGGCCATTACATCTCTTCTGATGTATTCAAGCAATTTGT
GGAGCGCGATGGAAAATTCAAGAAAACTCTTAATAATGATGTCCAAGCATTATTAAGTTT
GTATGAAGCAGCACAAATGAGAGTGCACGGGGAGGATATTCTCGAAGAAGCTCTTACTTT
TACCACTACTCATCTTGAGTCCATGATCCCCATGTTAAACAATCCACTCAAGGCTCAAAT
TATTGAAGCCTTAAGCCACCCTATACACAAAGTTATACCAAGATTGGGAGCAAGAAAATA
CATAGACATTTATGAAAACATGGAATCACACAACCATTTGCTTTTAAAATTTTCCAAATT
GGACTTTAACATGTTGCAAAAGCAGCATCAAAGAGAGCTTAGCGAGCTTACAAGCTGGTG
GAAAGATCTGGATCTTGCAAGCAAAGTGCCATATGCAAGAGACAAATTAGTTGAGGGTTA
CACATGGACATTGGGATTGTATTTCGAGCCTAAGTATAGTCGTGCAAGAAGAATGTTAGT
AAAAGTATTCAAAATGCTCTCAATCTGTGATGACACTTATGATGCATATGCAACTTTTGA
TGAACTTGTGCTTTTCACCAATGCAATACAGAGATGGGACATAAACGCCATGGATTCATT
ACCGCCATATATGAGACCTTTTTATCAAGCCATTCTGGATATCTTCGATGAAATGGAGGA
AGAATTGACCAAAGAAGGTAAATCAGACCGCGTTTACTATGGTAAATTTGAGATGAAAAA
GTTGGCTAGGGCCTATTTTAAAGAAGCGGAATGGTTAAATGCTGGCTATATTCCAAACTG
TGATCAGTATATAAAAAATGCAATTGTAAGCACTACCTTTATGGTGCTTGGAACAACTTC
TTTGATTGGTATGGAGGAATTCATAACAAAAGACACTTTTGAATGGATAACAAATGAGCC
TTCGATTCTTCGAGCTTCATCAACTATCTGCAGATTAATGGACGATATTAGTGATCATGA
AACTGACCAACAAAGAGGACATGTAGCTTCTGTCATTGAATGCTATATGAACGAATATGG
AGCTTCAAAGCAAGAGGCCTATGTTAAGTTTCGGAAGGAAGTCAAGAATGCATGGAAAGA
CATAAACAAGGCATTACTACGCCCTATTGAAGTACCAATATTTGTTCTCGAACGAATTTT
AAATCTTGCACGGACAATGGATACTTTTTTCCAAGATGAAGAAGATGGATATACAAATTC
CAATTCCAAATGTAAAGACATTATTACCTTGTTGCTTGTTGATTCTGTTACTATATGACG
ATCATAATGTGTATGCACCATTGGACAAAGCATTTGGAGCAAATGTGGAAACATTTTGCA
TCTTTATATTTATAATTAATTGGTTTATGTTTGCTTTCAGA
