Microarray Probes on PGSC0003DMT400030652
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_34222_PI426222305 |
JHI_St_60k_v1 |
GTCCTAATTCTGAGGAGGCCCCTACACATATGTAATTGTGTTTATCATTCTTGAAAATTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400030652
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400030652 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G41920.1 |
+2 |
8e-140 |
414 |
238/364 (65%) |
GRAS family transcription factor | chr5:16779982-16781199 FORWARD LENGTH=405 |
Transcript Sequence (1667 bp)
>PGSC0003DMT400030652 1667 pgsc_dm_v3.4
CAAAAATACAAAAACCTCACTTCAATGTGTCTTACAAAGATGAATAATTCCAAAAAGTCA
TCAACCTTTTTTTCATAAATCCCCCTTTCAATTATCCTCACCATTCATTTTTTTTTCTAC
TAACAATTCTTACATTCATTGCCATGTGATGTGATGAATGATCATGCTTCAATTCTCTTC
TGTATCTGCAACTCCAATTAGCCATACATCTTCATCTTCATCTTCATCTTCCATGTCTTC
TAAGCGCTCAATTGTTGAGTTTACTCCGGTCTCAGATGAACCTCAACTTCTTACTAAACG
GCCCCGAAACGAGGAGGAAGAAGAAGAAGGTGAGGAGTTAGTTCTCGTTGACGCCGATTC
CATCGGCCTTCGCCTTCTCGGCTTGCTCCTCCAATGCGCTGAGTTTGTTGCCATGGAGAA
TCTCGATGAAGCCGCTAATTTATTACCGGAAATCGCTGAGCTTTCATCGCCGTTCGGCTC
ATCGGCTGAGCGAGTCGCTGCTTACTTCGCTGAATCTCTATCGGCCAGAATCATCAGTTC
TCATCTCCGATTTTATTCTCCGCTTAACCTCAAATCCCTAACTCTCACACATTCCCAAAA
ACTCTTCACCGCTCTGCAATCTTACAATACAATAAGCCCGCTCATCAAATTCTCTCACTA
CACAGCTAATCAAGCTATTTACCAAGCATTAGAAGGTGAAGATCACGTCCACGTCATCGA
TCTCGACATCATGCAAGGTCTTCAATGGCCAGGATTGTTCCAAATCCTCTCCTCTCGATC
GAGAAAGCTCCGTTCCATCAAAATCACCGGCGTCGGATCCTCCATGGAATTACTCGAATC
CACCGGCCGTAGACTCACCGAATTCGCCAACTCATTCGGACTTCCGTTCGAGTTTCAACC
GTTTGAAGGCAAAATCGGACACATCACAGACCTGAATCAACTCGGAGTCAAAATTGGGGA
AACTACAGTTGTCAATTGGATGCACCATTGCCTGTACGATATCACAGGGAGTGATTTAGG
TACGTTCAGATTGTTAACTTTGTTAAGGCCGAAATTGATCACACTCGTTGAACAAGATCT
GAGTCACGGAGGAAACTTTTTGGGCCGATTCGTTGAGGCATTGCATTATTACTCAGCCTT
GTTTGATGCATTAGGGGATGGATTGAGTGAAGAGAGTGTAGAGAGGCATACGGTGGAACA
GCAGTTGTTCAGTAGCGAAATTAGGAATATTGTAGCAGTAGGTGGGCCCAAGAGGACCGG
GGAAGTACCCGTAGAGCGATGGGGCGTTGAAATGAAACGAATCGGGTTTTTACCCGTTTC
GTTATCGGGTACTCCAGCTGCTCAAGCAAGTTTATTGTTAGGGATGTTTCCGAGAGGGTA
TACTTTGGTCGACGAAAATGGGTGTTTGAAATTGGGATGGAAGGATTTATCTTTGTTGAC
TGCATCTGCATGGCAACCATGCGATTAAGATTGCCTTTTTTTTTTTTTGTTATTTCAATT
TGTAAGTGTTTCATAAGAAATTGGACATACTAATAAGTGAAGTGCTCTTGTTCACTTTGG
TCCTAATTCTGAGGAGGCCCCTACACATATGTAATTGTGTTTATCATTCTTGAAAATTAT
TCTTTTAAGAAAAATACTAATTGCATTGGGTTAAAGAAATTTTGTCC
