Microarray Probes on PGSC0003DMT400030569
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47607_PI426222305 |
JHI_St_60k_v1 |
GCAGACTCTATATGTGTGTGTGGTTATCTTTGTTTTCCTTATTGTGTTGGTTTCTTACAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400030569
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400030569 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G03420.1 |
+2 |
5e-70 |
224 |
97/118 (82%) |
Ku70-binding family protein | chr3:812527-813644 FORWARD LENGTH=194 |
Transcript Sequence (1464 bp)
>PGSC0003DMT400030569 1464 pgsc_dm_v3.4
ATCAAATATAGATTCGTTTGAATCTTGAAATCCGAAAACCCTAAGTCACCTCTCTCTCAC
GCCACCCATCCCCGTCCCCACGCCGCCTCAGTAGCAGCAGCAGGTAGCGCCGGCGCCGCC
TCAGCAACAGCAGCAGGTCGCGCGCCGCACCAGCAGACATCCGCAACTGCAGCAGACGGC
GGCAGCAGCCAGATTTATTTTCACCAAACATAAGAGAGAGAAGCCAGGAAACACGAACAA
CCAAATGGCGGAGTCATCCACCATCAACAAAGGAAGTACGGTGGAGGAATGCCAAGACAT
GATCCGGAGAGGTCTTAGAACTCCAATGGTGAAGTTCTTAAAGGAGCATTTGGAGAAATC
TGGTTGTCGAATTGGTGATAACTTCATAAAAGCTATCCATTGCGACCAGAAGATCAGCGG
CGGCTATGCTCGTGGACGTGGGGTAATCAACATAATTTATTATTCCTGGACTTTTCTATT
AGAAGTTGAGGTGGTCAATTTTAAGTTTATGCCTATTGTGGATTTGAAGAACATTTCTTC
TTGTGTTCTAAATACAGTTGTGTTAATTTTTCTGTCTTGGAGTTGCCAAATTCAATTGAA
ACATTGTGGGTCAGTGGAGGACAGACACCTTTTGAAGTAGATAGGGTGTCAAAGGTGAAT
TCAGGATTGAAGTTACACCTCTACACTAACTTCTCCTGTGTGATGATGGATGTGGACTTT
GTATTAATATTTATTTAAAATATGCAGACTCTATATGTGTGTGTGGTTATCTTTGTTTTC
CTTATTGTGTTGGTTTCTTACATCCTCAAGTATTTATTGATCTTGTTTCTTTTTGGCTAT
TAAGATAATTGTGTGCAGTAACCACATGCAAATTCAAGATGAGGTGAATCAAGTTCTCAT
ACATGAGTTAATTCATGCATATGATGAGTGTCGTGCTGCAAACTTGGACTGGGCTAATTG
CGCTCATCATGCTTGTAGTGAAATCAGAGCTGGCCATCTTAGCGGTGATTGCCATTACAA
ACGGGAATTACTGAGAGGTTATCTTAAGATACGGGGCCATGAACAAGAATGTGTAAAGCG
AAGAGTTATGAAATCGATGTCTGGTAACCCAAACTGTTCAGAGTCTGCGAGTAGGGATGC
CATGGAAGCTATCTGGGATGTTTGTTACAATGATACTAAGCCCTTTGACAGAGCCCCTTG
AAACATAATGATTACCAGTAGCTTCTCAGAGGTAACCAAGGTGGCCTTCTGGCAAACTCG
ATACACTGATATCAGATTGAAAAAATCGCGGTGTTGTTTTAGTTTTGGTTGATACCATTG
CATTATTGAGGCATATTGACTGATCTGTGATGTAATGAGCATAAGTTCTGTAAAATTTAC
AGGGATTTTTTTTACCTATTCTAGGAATTTTTCATAATAAGTGATTTTTTTTCTTGTTTT
GCAATATGAATTGTTCTTGTGTCA
